EC 3.6.1.13: ADP-ribose diphosphatase

HydrolasesOpen in Browse

CatLog read 81 records for EC 3.6.1.13 from 6 papers, for 3 organisms. Names in these papers: ADP-ribose pyrophosphatase (TtADPRase), hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase), NUDT5, AtNUDT2 (Nudix hydrolase, ADP-ribose/NADH pyrophosphatase) and 4 more.

Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units.

CatLog also holds 76 records for EC 3.6.1.13 that are not yet re-read: from its earlier version, built from the enzyme databases and partly checked against the papers. All records for EC 3.6.1.13 in Browse.

Papers

Papers with records for EC 3.6.1.13
PaperOrganismsRecords
Molecular mechanism of the Thermus thermophilus ADP-ribose pyrophosphatase from mutational and kinetic studiesThermus thermophilus35
Molecular mechanism of ADP-ribose hydrolysis by human NUDT5 from structural and kinetic studiesHomo sapiens22
Structural insights into the Thermus thermophilus ADP-ribose pyrophosphatase mechanism via crystal structures with the bound substrate and metalThermus thermophilus10
Comprehensive analysis of cytosolic Nudix hydrolases in Arabidopsis thalianaArabidopsis thaliana7
NUDT5 hydrolyzes oxidized deoxyribonucleoside diphosphates with broad substrate specificityHomo sapiens6
Molecular characterization of organelle-type Nudix hydrolases in ArabidopsisArabidopsis thaliana1

Records

Records for EC 3.6.1.13 read from the paper
EnzymeOrganismSubstratekcat (s⁻¹)Km (mM)kcat/Km (mM⁻¹ s⁻¹)ConditionsPaperOpen record
ADP-ribose pyrophosphatase (TtADPRase)Thermus thermophilusADP-glucose9.13.162.88pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase), ADP-glucose
ADP-ribose pyrophosphatase (TtADPRase)Thermus thermophilusADP-ribose5 mM MgCl25.70.1150pH 7.5, 25 °CPMID 15210687Open record: ADP-ribose pyrophosphatase (TtADPRase), ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)Thermus thermophilusADP-ribose250 µM ZnSO4; reversed-phase HPLC of AMP/ADPR280.3770pH 7.5, 25 °CPMID 15210687Open record: ADP-ribose pyrophosphatase (TtADPRase), ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)Thermus thermophilusADP-ribose10.650.1199.5pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase), ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)Thermus thermophilusADP-ribose20 mM MgCl2; 10-10000 nM enzyme; 0-10 mM ADPR24.37——25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase), ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)Thermus thermophilusADP-ribose5 mM MgCl2; 5-5000 nM enzyme; 0-2 mM ADPR7.34——25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase), ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)Thermus thermophilusADP-ribose5 mM MnCl2; 5-5000 nM enzyme; 0-2 mM ADPR1.42——25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase), ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)Thermus thermophilusADP-ribose5 mM ZnCl2; 5-5000 nM enzyme; 0-2 mM ADPR10.97——25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase), ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)Thermus thermophilusCDP-ribose3.361.362.48pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase), CDP-ribose
ADP-ribose pyrophosphatase (TtADPRase)Thermus thermophilusGDP-ribose3.571.13.24pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase), GDP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant D126NThermus thermophilusADP-ribose0.70.03120pH 7.5, 25 °CPMID 15210687Open record: ADP-ribose pyrophosphatase (TtADPRase) variant D126N, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant D128NThermus thermophilusADP-ribose2.20.05837pH 7.5, 25 °CPMID 15210687Open record: ADP-ribose pyrophosphatase (TtADPRase) variant D128N, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E108QThermus thermophilusADP-ribose2.970.2910.4pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E108Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E127QThermus thermophilusADP-ribose4.10.07157pH 7.5, 25 °CPMID 15210687Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E127Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E129QThermus thermophilusADP-ribose0.70.04416pH 7.5, 25 °CPMID 15210687Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E129Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E63QThermus thermophilusADP-ribose0.230.40.575pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E63Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E70QThermus thermophilusADP-ribose0.410.01811.2pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E70Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E70QThermus thermophilusADP-ribose1.48——25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E70Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E73QThermus thermophilusADP-ribose2.070.03656.4pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E73Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E82QThermus thermophilusADP-ribose5 mM MgCl21.1 × 10⁻⁴0.363 × 10⁻⁴pH 7.5, 25 °CPMID 15210687Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E82Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E82QThermus thermophilusADP-ribose250 µM ZnSO41.4 × 10⁻⁴0.2150.0061pH 7.5, 25 °CPMID 15210687Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E82Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E82QThermus thermophilusADP-ribose9.39 × 10⁻⁴0.110.00842pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E82Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E82QThermus thermophilusADP-ribose0.00171——25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E82Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E85QThermus thermophilusADP-ribose1.120.04325.9pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E85Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E85QThermus thermophilusADP-ribose3.12——25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E85Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E86QThermus thermophilusADP-ribose5 mM MgCl21.5 × 10⁻⁴0.090.0017pH 7.5, 25 °CPMID 15210687Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E86Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E86QThermus thermophilusADP-ribose250 µM ZnSO43.2 × 10⁻⁴0.3250.001pH 7.5, 25 °CPMID 15210687Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E86Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E86QThermus thermophilusADP-ribose0.001530.10.0148pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E86Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant E86QThermus thermophilusADP-ribose0.00226——25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant E86Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant H33AThermus thermophilusADP-ribose4.160.429.93pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant H33A, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant I19AThermus thermophilusADP-ribose5.681.244.58pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant I19A, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant L68AThermus thermophilusADP-ribose5.930.3118.9pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant L68A, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant Q52AThermus thermophilusADP-ribose6.740.2428.6pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant Q52A, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant R18QThermus thermophilusADP-ribose17.050.12148pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant R18Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant R27QThermus thermophilusADP-ribose12.90.1495.6pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant R27Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant R54QThermus thermophilusADP-ribose0.04110.650.0626pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant R54Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant R54QThermus thermophilusADP-ribose2.32——25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant R54Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant R81QThermus thermophilusADP-ribose0.0350.0271.29pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant R81Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant R81QThermus thermophilusADP-ribose1.12——25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant R81Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant S102AThermus thermophilusADP-ribose2.430.693.51pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant S102A, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant S153AThermus thermophilusADP-ribose3.30.134.4pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant S153A, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant T110AThermus thermophilusADP-ribose2.650.0643pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant T110A, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant T155AThermus thermophilusADP-ribose2.420.0552.5pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant T155A, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant Y28QThermus thermophilusADP-ribose10.040.425.1pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant Y28Q, ADP-ribose
ADP-ribose pyrophosphatase (TtADPRase)variant Y99FThermus thermophilusADP-ribose3.320.0937.7pH 7.63, 25 °CPMID 15981998Open record: ADP-ribose pyrophosphatase (TtADPRase) variant Y99F, ADP-ribose
AtNUDT10 (Nudix hydrolase, ADP-ribose/NADH pyrophosphatase)Arabidopsis thalianaadenosine 5'-diphosphoribose0.060.02740.63pH 8, 37 °CPMID 15878881Open record: AtNUDT10 (Nudix hydrolase, ADP-ribose/NADH pyrophosphatase), adenosine 5'-diphosphoribose
AtNUDT2 (Nudix hydrolase, ADP-ribose/NADH pyrophosphatase)Arabidopsis thalianaadenosine 5'-diphosphoribose0.120.01697pH 8, 37 °CPMID 15878881Open record: AtNUDT2 (Nudix hydrolase, ADP-ribose/NADH pyrophosphatase), adenosine 5'-diphosphoribose
AtNUDT2 (Nudix hydrolase, ADP-ribose/NADH pyrophosphatase)Arabidopsis thalianaNADH0.010.02234.3pH 8, 37 °CPMID 15878881Open record: AtNUDT2 (Nudix hydrolase, ADP-ribose/NADH pyrophosphatase), NADH
AtNUDT6 (Nudix hydrolase, ADP-ribose/NADH pyrophosphatase)Arabidopsis thalianaadenosine 5'-diphosphoribose0.110.0234.6pH 8, 37 °CPMID 15878881Open record: AtNUDT6 (Nudix hydrolase, ADP-ribose/NADH pyrophosphatase), adenosine 5'-diphosphoribose
AtNUDT6 (Nudix hydrolase, ADP-ribose/NADH pyrophosphatase)Arabidopsis thalianaNADH0.180.013714pH 8, 37 °CPMID 15878881Open record: AtNUDT6 (Nudix hydrolase, ADP-ribose/NADH pyrophosphatase), NADH
AtNUDT7 (Nudix hydrolase, ADP-ribose/NADH pyrophosphatase)Arabidopsis thalianaadenosine 5'-diphosphoribose0.120.02325.3pH 8, 37 °CPMID 15878881Open record: AtNUDT7 (Nudix hydrolase, ADP-ribose/NADH pyrophosphatase), adenosine 5'-diphosphoribose
AtNUDT7 (Nudix hydrolase, ADP-ribose/NADH pyrophosphatase)Arabidopsis thalianaNADH0.060.03721.5pH 8, 37 °CPMID 15878881Open record: AtNUDT7 (Nudix hydrolase, ADP-ribose/NADH pyrophosphatase), NADH
AtNUDX23Arabidopsis thalianaADP-ribose0.810.3862.1pH 8, 37 °CPMID 18815383Open record: AtNUDX23, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)Homo sapiensADP-ribose11.40.0204560PMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase), ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)Homo sapiensADP-ribose11.80.0223530pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase), ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)Homo sapiensADP-riboseresidues 1-210 (ΔhNUDT5, C-terminal 9 residues deleted)12.70.0214590pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase), ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant C139AHomo sapiensADP-ribose13.70.0463300pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant C139A, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant D133AHomo sapiensADP-ribose7.30.087983pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant D133A, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant D133NHomo sapiensADP-ribose10.40.0456230pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant D133N, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant D164AHomo sapiensADP-ribose12.20.0434390pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant D164A, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant D164NHomo sapiensADP-ribose13.10.0209630pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant D164N, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant E112QHomo sapiensADP-ribose0.00190.07020.027pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant E112Q, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant E115QHomo sapiensADP-ribose2.70.040267pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant E115Q, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant E116QHomo sapiensADP-ribose0.00690.02570.23pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant E116Q, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant E166QHomo sapiensADP-ribose0.10.02314.3pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant E166Q, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant E93QHomo sapiensADP-ribose4.50.0389120pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant E93Q, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant L98AHomo sapiensADP-ribose12.40.128397pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant L98A, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant Q82AHomo sapiensADP-ribose10.30.127181pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant Q82A, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant R111QHomo sapiensADP-ribose0.320.027913pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant R111Q, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant R196QHomo sapiensADP-ribose60.119750pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant R196Q, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant R51QHomo sapiensADP-ribose0.410.32131.2pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant R51Q, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant R84QHomo sapiensADP-ribose0.180.10841.7pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant R84Q, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant W28AHomo sapiensADP-ribose13.30.18472pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant W28A, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant W28A/W46AHomo sapiensADP-ribose0.0580.14970.05pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant W28A/W46A, ADP-ribose
hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase)variant W46AHomo sapiensADP-ribose11.30.126589pH 7, 37 °CPMID 18462755Open record: hNUDT5 (human NUDT5, ADP-ribose pyrophosphatase) variant W46A, ADP-ribose
NUDT5Homo sapiens2'-deoxyadenosine 5'-diphosphate0.006080.01260.48pH 8, 30 °CPMID 19699693Open record: NUDT5, 2'-deoxyadenosine 5'-diphosphate
NUDT5Homo sapiens2'-deoxyguanosine 5'-diphosphate0.015480.00762.03pH 8, 30 °CPMID 19699693Open record: NUDT5, 2'-deoxyguanosine 5'-diphosphate
NUDT5Homo sapiens2-hydroxy-2'-deoxyadenosine 5'-diphosphate0.003770.00880.43pH 8, 30 °CPMID 19699693Open record: NUDT5, 2-hydroxy-2'-deoxyadenosine 5'-diphosphate
NUDT5Homo sapiens5-formyl-2'-deoxyuridine 5'-diphosphate0.003480.0040.87pH 8, 30 °CPMID 19699693Open record: NUDT5, 5-formyl-2'-deoxyuridine 5'-diphosphate
NUDT5Homo sapiens8-hydroxy-2'-deoxyadenosine 5'-diphosphate (7,8-dihydro-8-oxo-2'-deoxyadenosine 5'-diphosphate)0.008970.00293.1pH 8, 30 °CPMID 19699693Open record: NUDT5, 8-hydroxy-2'-deoxyadenosine 5'-diphosphate (7,8-dihydro-8-oxo-2'-deoxyadenosine 5'-diphosphate)
NUDT5Homo sapiens8-hydroxy-2'-deoxyguanosine 5'-diphosphate (7,8-dihydro-8-oxo-2'-deoxyguanosine 5'-diphosphate)0.006150.00212.93pH 8, 30 °CPMID 19699693Open record: NUDT5, 8-hydroxy-2'-deoxyguanosine 5'-diphosphate (7,8-dihydro-8-oxo-2'-deoxyguanosine 5'-diphosphate)