Values CatLog read from this paper
Structural basis for the enantiospecificities of R- and S-specific phenoxypropionate/alpha-ketoglutarate dioxygenases
PMID 16731970doi:10.1110/ps.052059406Open in Browse
The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.
CatLog read 17 records (49 values) from this paper: SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase), RdpA ((R)-specific dichlorprop/α-ketoglutarate dioxygenase) from Sphingomonas herbicidovorans.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks. CatLog calculated the 2 kcat/Km values marked “calc.” from kcat and Km; no printed kcat/Km was read for those records.
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| RdpA ((R)-specific dichlorprop/α-ketoglutarate dioxygenase) | Sphingomonas herbicidovorans | (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid | 4.2 | 0.38 | 11 | pH 6.75, 30 °C | Open record: RdpA ((R)-specific dichlorprop/α-ketoglutarate dioxygenase), (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid |
| RdpA ((R)-specific dichlorprop/α-ketoglutarate dioxygenase)variant F171A | Sphingomonas herbicidovorans | (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid | 2.92 | 0.108 | 27 | pH 6.75, 30 °C | Open record: RdpA ((R)-specific dichlorprop/α-ketoglutarate dioxygenase) variant F171A, (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid |
| RdpA ((R)-specific dichlorprop/α-ketoglutarate dioxygenase)variant F171Q | Sphingomonas herbicidovorans | (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid | 3.38 | 0.438 | 7.7 | pH 6.75, 30 °C | Open record: RdpA ((R)-specific dichlorprop/α-ketoglutarate dioxygenase) variant F171Q, (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid |
| RdpA ((R)-specific dichlorprop/α-ketoglutarate dioxygenase)variant I106A | Sphingomonas herbicidovorans | (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid | 3.97 | 8.9 | 0.5 | pH 6.75, 30 °C | Open record: RdpA ((R)-specific dichlorprop/α-ketoglutarate dioxygenase) variant I106A, (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid |
| RdpA ((R)-specific dichlorprop/α-ketoglutarate dioxygenase)variant Q93A | Sphingomonas herbicidovorans | (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid | 4.33 | 2.8 | 1.5 | pH 6.75, 30 °C | Open record: RdpA ((R)-specific dichlorprop/α-ketoglutarate dioxygenase) variant Q93A, (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid |
| RdpA ((R)-specific dichlorprop/α-ketoglutarate dioxygenase)variant R285A | Sphingomonas herbicidovorans | (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid | 0.87 | 1.55 | 0.5 | pH 6.75, 30 °C | Open record: RdpA ((R)-specific dichlorprop/α-ketoglutarate dioxygenase) variant R285A, (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid |
| RdpA ((R)-specific dichlorprop/α-ketoglutarate dioxygenase)variant V80A | Sphingomonas herbicidovorans | (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid | 4.13 | 2.3 | 1.8 | pH 6.75, 30 °C | Open record: RdpA ((R)-specific dichlorprop/α-ketoglutarate dioxygenase) variant V80A, (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid |
| SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase) | Sphingomonas herbicidovorans | (2S)-2-(4-chloro-2-methylphenoxy)propanoic acid | 16.83 | 0.161 | 104 | pH 6.75, 30 °C | Open record: SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase), (2S)-2-(4-chloro-2-methylphenoxy)propanoic acid |
| SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase) | Sphingomonas herbicidovorans | 2-(4-chloro-2-methylphenoxy)propanoic acid | 14.98 | 0.234 | 64.2 | pH 6.75, 30 °C | Open record: SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase), 2-(4-chloro-2-methylphenoxy)propanoic acid |
| SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase)variant E69A | Sphingomonas herbicidovorans | (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid | 1.08 | 5.4 | 0.20 calc. | pH 6.75, 30 °C | Open record: SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase) variant E69A, (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid |
| SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase)variant E69A | Sphingomonas herbicidovorans | (2S)-2-(4-chloro-2-methylphenoxy)propanoic acid | 4.02 | 0.091 | 44.2 | pH 6.75, 30 °C | Open record: SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase) variant E69A, (2S)-2-(4-chloro-2-methylphenoxy)propanoic acid |
| SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase)variant E69A | Sphingomonas herbicidovorans | 2-(4-chloro-2-methylphenoxy)propanoic acid | 3.23 | 0.181 | 18 | pH 6.75, 30 °C | Open record: SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase) variant E69A, 2-(4-chloro-2-methylphenoxy)propanoic acid |
| SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase)variant G97I/N98G | Sphingomonas herbicidovorans | (2S)-2-(4-chloro-2-methylphenoxy)propanoic acid | 0.7 | 1.1 | 0.67 | pH 6.75, 30 °C | Open record: SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase) variant G97I/N98G, (2S)-2-(4-chloro-2-methylphenoxy)propanoic acid |
| SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase)variant H208A | Sphingomonas herbicidovorans | (2S)-2-(4-chloro-2-methylphenoxy)propanoic acid | 0.35 | 2.9 | 0.12 | pH 6.75, 30 °C | Open record: SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase) variant H208A, (2S)-2-(4-chloro-2-methylphenoxy)propanoic acid |
| SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase)variant R207A | Sphingomonas herbicidovorans | (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid | 0.0027 | 4 | 6.7 × 10⁻⁴ calc. | pH 6.75, 30 °C | Open record: SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase) variant R207A, (2R)-2-(4-chloro-2-methylphenoxy)propanoic acid |
| SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase)variant R207A | Sphingomonas herbicidovorans | (2S)-2-(4-chloro-2-methylphenoxy)propanoic acid | 3.97 | 2.5 | 1.7 | pH 6.75, 30 °C | Open record: SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase) variant R207A, (2S)-2-(4-chloro-2-methylphenoxy)propanoic acid |
| SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase)variant R207A | Sphingomonas herbicidovorans | 2-(4-chloro-2-methylphenoxy)propanoic acid | 1.95 | 2.78 | 0.67 | pH 6.75, 30 °C | Open record: SdpA ((S)-specific dichlorprop/α-ketoglutarate dioxygenase) variant R207A, 2-(4-chloro-2-methylphenoxy)propanoic acid |