Values CatLog read from this paper
Improving the catalytic efficiency of a meta-cleavage product hydrolase (CumD) from Pseudomonas fluorescens IP01
PMID 16844437doi:10.1016/j.bbapap.2006.05.010Open in Browse
The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.
CatLog read 33 records (99 values) from this paper: CumD (meta-cleavage product hydrolase) from Pseudomonas fluorescens.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks.
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| CumD (meta-cleavage product hydrolase) | Pseudomonas fluorescens | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate | 0.037 | 0.0022 | 17 | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase), 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate |
| CumD (meta-cleavage product hydrolase) | Pseudomonas fluorescens | 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate | 23.1 | 0.0078 | 2.96 × 10³ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase), 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase) | Pseudomonas fluorescens | 2-hydroxy-6-oxohepta-2,4-dienoate | 19.5 | 0.0089 | 2.16 × 10³ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase), 2-hydroxy-6-oxohepta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase) | Pseudomonas fluorescens | 2-hydroxy-6-oxoocta-2,4-dienoate | 42.4 | 0.011 | 3.82 × 10³ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase), 2-hydroxy-6-oxoocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant A129V | Pseudomonas fluorescens | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate | 0.01 | 0.01 | 1 | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant A129V, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant A129V | Pseudomonas fluorescens | 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate | 25 | 0.0056 | 4.5 × 10³ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant A129V, 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant A129V | Pseudomonas fluorescens | 2-hydroxy-6-oxohepta-2,4-dienoate | 81 | 0.0098 | 8.3 × 10³ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant A129V, 2-hydroxy-6-oxohepta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant A129V | Pseudomonas fluorescens | 2-hydroxy-6-oxoocta-2,4-dienoate | 75 | 0.0018 | 4.2 × 10⁴ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant A129V, 2-hydroxy-6-oxoocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant A129V/I199V | Pseudomonas fluorescens | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate | 0.01 | 0.017 | 1 | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant A129V/I199V, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant A129V/I199V | Pseudomonas fluorescens | 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate | 4.5 | 0.0035 | 1.3 × 10³ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant A129V/I199V, 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant A129V/I199V | Pseudomonas fluorescens | 2-hydroxy-6-oxohepta-2,4-dienoate | 19 | 0.0048 | 4 × 10³ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant A129V/I199V, 2-hydroxy-6-oxohepta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant A129V/I199V | Pseudomonas fluorescens | 2-hydroxy-6-oxoocta-2,4-dienoate | 35 | 0.005 | 7 × 10³ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant A129V/I199V, 2-hydroxy-6-oxoocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant A129V/V227I | Pseudomonas fluorescens | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate | 0.002 | 0.0058 | 0.3 | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant A129V/V227I, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant A129V/V227I | Pseudomonas fluorescens | 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate | 0.73 | 0.01 | 70 | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant A129V/V227I, 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant A129V/V227I | Pseudomonas fluorescens | 2-hydroxy-6-oxohepta-2,4-dienoate | 29 | 0.0055 | 5.3 × 10³ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant A129V/V227I, 2-hydroxy-6-oxohepta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant A129V/V227I | Pseudomonas fluorescens | 2-hydroxy-6-oxoocta-2,4-dienoate | 24 | 0.0024 | 1 × 10⁴ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant A129V/V227I, 2-hydroxy-6-oxoocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant F104M | Pseudomonas fluorescens | 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate | 6.4 | 0.004 | 1.6 × 10³ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant F104M, 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant F104M | Pseudomonas fluorescens | 2-hydroxy-6-oxohepta-2,4-dienoate | 6.5 | 0.0039 | 1.7 × 10³ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant F104M, 2-hydroxy-6-oxohepta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant F104M | Pseudomonas fluorescens | 2-hydroxy-6-oxoocta-2,4-dienoate | 15.4 | 0.0027 | 5.8 × 10³ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant F104M, 2-hydroxy-6-oxoocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant I199V | Pseudomonas fluorescens | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate | 0.02 | 4.5 × 10⁻⁴ | 44 | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant I199V, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant I199V | Pseudomonas fluorescens | 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate | 29 | 0.0014 | 2.1 × 10⁴ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant I199V, 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant I199V | Pseudomonas fluorescens | 2-hydroxy-6-oxohepta-2,4-dienoate | 38 | 0.0035 | 1.1 × 10⁴ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant I199V, 2-hydroxy-6-oxohepta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant I199V | Pseudomonas fluorescens | 2-hydroxy-6-oxoocta-2,4-dienoate | 37 | 0.0023 | 1.6 × 10⁴ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant I199V, 2-hydroxy-6-oxoocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant S34A | Pseudomonas fluorescens | 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate | 6.7 | 0.005 | 1.4 × 10³ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant S34A, 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant S34A | Pseudomonas fluorescens | 2-hydroxy-6-oxohepta-2,4-dienoate | 0.3 | 0.0025 | 110 | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant S34A, 2-hydroxy-6-oxohepta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant S34A | Pseudomonas fluorescens | 2-hydroxy-6-oxoocta-2,4-dienoate | 1.3 | 0.0031 | 420 | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant S34A, 2-hydroxy-6-oxoocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant S34G | Pseudomonas fluorescens | 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate | 8.1 | 8 × 10⁻⁴ | 1.1 × 10⁴ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant S34G, 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant S34G | Pseudomonas fluorescens | 2-hydroxy-6-oxohepta-2,4-dienoate | 1.5 | 0.0026 | 560 | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant S34G, 2-hydroxy-6-oxohepta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant S34G | Pseudomonas fluorescens | 2-hydroxy-6-oxoocta-2,4-dienoate | 8.4 | 0.0042 | 2 × 10³ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant S34G, 2-hydroxy-6-oxoocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant V227I | Pseudomonas fluorescens | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate | 0.02 | 0.0049 | 4 | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant V227I, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant V227I | Pseudomonas fluorescens | 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate | 20 | 0.0049 | 4.1 × 10³ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant V227I, 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant V227I | Pseudomonas fluorescens | 2-hydroxy-6-oxohepta-2,4-dienoate | 52 | 0.0028 | 1.9 × 10⁴ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant V227I, 2-hydroxy-6-oxohepta-2,4-dienoate |
| CumD (meta-cleavage product hydrolase)variant V227I | Pseudomonas fluorescens | 2-hydroxy-6-oxoocta-2,4-dienoate | 78 | 0.002 | 3.9 × 10⁴ | pH 7.5, 25 °C | Open record: CumD (meta-cleavage product hydrolase) variant V227I, 2-hydroxy-6-oxoocta-2,4-dienoate |