Values CatLog read from this paper
Catalytic mechanism of cyclic di-GMP-specific phosphodiesterase: a study of the EAL domain-containing RocR from Pseudomonas aeruginosa
PMID 18344366doi:10.1128/jb.00165-08Open in Browse
The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.
CatLog read 12 records (34 values) from this paper: RocR, PA2567 (GAF-GGDEF-EAL protein) from Pseudomonas aeruginosa.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks.
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| PA2567 (GAF-GGDEF-EAL protein) | Pseudomonas aeruginosa | cyclic di-GMP | 0.39 | — | — | pH 8 | Open record: PA2567 (GAF-GGDEF-EAL protein), cyclic di-GMP |
| RocR | Pseudomonas aeruginosa | cyclic di-GMP | 0.67 | 0.0032 | 210 | pH 8, 23 °C | Open record: RocR, cyclic di-GMP |
| RocRvariant D296A | Pseudomonas aeruginosa | cyclic di-GMP | 0.021 | 0.0086 | 2.7 | pH 8, 23 °C | Open record: RocR variant D296A, cyclic di-GMP |
| RocRvariant D318A | Pseudomonas aeruginosa | cyclic di-GMP | 0.08 | 0.0059 | 14 | pH 8, 23 °C | Open record: RocR variant D318A, cyclic di-GMP |
| RocRvariant E268Q | Pseudomonas aeruginosa | cyclic di-GMP | 0.0015 | 3 × 10⁻⁴ | 4.8 | pH 8, 23 °C | Open record: RocR variant E268Q, cyclic di-GMP |
| RocRvariant E352D | Pseudomonas aeruginosa | cyclic di-GMP | 2.2 × 10⁻⁵ | 0.0022 | 0.01 | pH 8, 23 °C | Open record: RocR variant E352D, cyclic di-GMP |
| RocRvariant E352Q | Pseudomonas aeruginosa | cyclic di-GMP | 1.1 × 10⁻⁵ | 0.0038 | 0.0029 | pH 8, 23 °C | Open record: RocR variant E352Q, cyclic di-GMP |
| RocRvariant E355A | Pseudomonas aeruginosa | cyclic di-GMP | 0.51 | 0.0026 | 190 | pH 8, 23 °C | Open record: RocR variant E355A, cyclic di-GMP |
| RocRvariant Q161A | Pseudomonas aeruginosa | cyclic di-GMP | 0.13 | 0.0063 | 21 | pH 8, 23 °C | Open record: RocR variant Q161A, cyclic di-GMP |
| RocRvariant Q372A | Pseudomonas aeruginosa | cyclic di-GMP | 0.08 | 0.0013 | 62 | pH 8, 23 °C | Open record: RocR variant Q372A, cyclic di-GMP |
| RocRvariant R179A | Pseudomonas aeruginosa | cyclic di-GMP | 0.023 | 0.008 | 2.9 | pH 8, 23 °C | Open record: RocR variant R179A, cyclic di-GMP |
| RocRvariant T267A | Pseudomonas aeruginosa | cyclic di-GMP | 0.049 | 0.0022 | 22 | pH 8, 23 °C | Open record: RocR variant T267A, cyclic di-GMP |