Values CatLog read from this paper
Crystal structure and functional assignment of YfaU, a metal ion dependent class II aldolase from Escherichia coli K12
PMID 18754683doi:10.1021/bi800943gOpen in Browse
The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.
CatLog read 6 records (18 values) from this paper: YfaU (2-dehydro-3-deoxy-L-rhamnonate aldolase), HpcH (4-hydroxy-2-ketoheptane-1,7-dioate aldolase) from Escherichia coli.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks.
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| HpcH (4-hydroxy-2-ketoheptane-1,7-dioate aldolase) | Escherichia coli | 4-hydroxy-2-ketoheptane-1,7-dioateCo2+-activated HpcH | 332 | 0.03 | 1.1 × 10⁴ | Open record: HpcH (4-hydroxy-2-ketoheptane-1,7-dioate aldolase), 4-hydroxy-2-ketoheptane-1,7-dioate | |
| HpcH (4-hydroxy-2-ketoheptane-1,7-dioate aldolase) | Escherichia coli | 4-hydroxy-2-ketoheptane-1,7-dioateMg2+-activated HpcH | 9.4 | 0.05 | 190 | Open record: HpcH (4-hydroxy-2-ketoheptane-1,7-dioate aldolase), 4-hydroxy-2-ketoheptane-1,7-dioate | |
| YfaU (2-dehydro-3-deoxy-L-rhamnonate aldolase) | Escherichia coli | 4-hydroxy-2-ketoheptane-1,7-dioateMg2+-activated YfaU; 0.5 mM MgCl2 | 0.54 | 0.15 | 3.6 | pH 8 | Open record: YfaU (2-dehydro-3-deoxy-L-rhamnonate aldolase), 4-hydroxy-2-ketoheptane-1,7-dioate |
| YfaU (2-dehydro-3-deoxy-L-rhamnonate aldolase) | Escherichia coli | 4-hydroxy-2-ketoheptane-1,7-dioateNi2+-activated YfaU; 0.5 mM NiCl2 | 299 | 0.1 | 2.7 × 10³ | pH 8 | Open record: YfaU (2-dehydro-3-deoxy-L-rhamnonate aldolase), 4-hydroxy-2-ketoheptane-1,7-dioate |
| YfaU (2-dehydro-3-deoxy-L-rhamnonate aldolase) | Escherichia coli | 4-hydroxy-2-ketohexanoic acid | 447 | 0.05 | 9.9 × 10³ | pH 8 | Open record: YfaU (2-dehydro-3-deoxy-L-rhamnonate aldolase), 4-hydroxy-2-ketohexanoic acid |
| YfaU (2-dehydro-3-deoxy-L-rhamnonate aldolase) | Escherichia coli | 4-hydroxy-2-ketopentanoic acid | 396 | 0.1 | 3.9 × 10³ | pH 8 | Open record: YfaU (2-dehydro-3-deoxy-L-rhamnonate aldolase), 4-hydroxy-2-ketopentanoic acid |