CatLogenzyme kinetics catalog

Values CatLog read from this paper

A conserved gene cluster rules anaerobic oxidative degradation of L-ornithine

PMID 19251850doi:10.1128/jb.01777-08Open in Browse

The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.

CatLog read 7 records (17 values) from this paper: (2R,4S)-2,4-diaminopentanoate dehydrogenase (DAPDH), 2-amino-4-ketopentanoate thiolase (AKPT), ornithine racemase (OR) from Clostridium sticklandii.

Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks.

EC 1.4.1.12, EC 2.3.1.263, EC 5.1.1.12

EnzymeOrganismSubstratekcat (s⁻¹)Km (mM)kcat/Km (mM⁻¹ s⁻¹)Conditions
(2R,4S)-2,4-diaminopentanoate dehydrogenase (DAPDH)—(2R,4R)-2,4-diaminopentanoate2.8——pH 9Open
(2R,4S)-2,4-diaminopentanoate dehydrogenase (DAPDH)—(2R,4S)-2,4-diaminopentanoate51.6——pH 9Open
(2R,4S)-2,4-diaminopentanoate dehydrogenase (DAPDH)—NAD+340.0162.1 × 10³pH 9Open
(2R,4S)-2,4-diaminopentanoate dehydrogenase (DAPDH)—NADP+52.562pH 9Open
2-amino-4-ketopentanoate thiolase (AKPT)—2-amino-4-oxopentanoate3.40.03597pH 8Open
2-amino-4-ketopentanoate thiolase (AKPT)—coenzyme A3.50.018190pH 8Open
ornithine racemase (OR)Clostridium sticklandiiL-ornithine1.66 × 10³0.523.2 × 10³pH 8.5Open