Values CatLog read from this paper
Expression of peptidylarginine deiminase from Porphyromonas gingivalis in Escherichia coli: enzyme purification and characterization
PMID 19545534doi:10.1016/j.abb.2009.06.010Open in Browse
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CatLog read 14 records (38 values) from this paper: peptidylarginine deiminase (PAD) from Porphyromonas gingivalis.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks.
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| peptidylarginine deiminase (PAD) | Porphyromonas gingivalis | agmatine | 0.007 | 31 | 2.3 × 10⁻⁴ | pH 9.5, 37 °C | Open record: peptidylarginine deiminase (PAD), agmatine |
| peptidylarginine deiminase (PAD) | Porphyromonas gingivalis | Arg-Pro-Pro-Gly-Phe-Ser-Pro-Phe-Arg | 0.043 | 0.021 | 2.1 | pH 9.5, 37 °C | Open record: peptidylarginine deiminase (PAD), Arg-Pro-Pro-Gly-Phe-Ser-Pro-Phe-Arg |
| peptidylarginine deiminase (PAD) | Porphyromonas gingivalis | D-arginine | 0.058 | 1.9 | 0.031 | pH 9.5, 37 °C | Open record: peptidylarginine deiminase (PAD), D-arginine |
| peptidylarginine deiminase (PAD) | Porphyromonas gingivalis | homoarginine | 0.11 | 4.7 | 0.024 | pH 9.5, 37 °C | Open record: peptidylarginine deiminase (PAD), homoarginine |
| peptidylarginine deiminase (PAD) | Porphyromonas gingivalis | L-arginine | 0.22 | 1.2 | 0.19 | pH 9.5, 37 °C | Open record: peptidylarginine deiminase (PAD), L-arginine |
| peptidylarginine deiminase (PAD) | Porphyromonas gingivalis | L-arginine hydroxamate | 0.15 | 6.9 | 0.022 | pH 9.5, 37 °C | Open record: peptidylarginine deiminase (PAD), L-arginine hydroxamate |
| peptidylarginine deiminase (PAD) | Porphyromonas gingivalis | L-canavanine | 0.0052 | 6 | 9.3 × 10⁻⁴ | pH 9.5, 37 °C | Open record: peptidylarginine deiminase (PAD), L-canavanine |
| peptidylarginine deiminase (PAD) | Porphyromonas gingivalis | Lys-Arg-Pro-Pro-Gly-Phe-Ser-Pro-Leu | 0.0068 | 0.033 | 0.21 | pH 9.5, 37 °C | Open record: peptidylarginine deiminase (PAD), Lys-Arg-Pro-Pro-Gly-Phe-Ser-Pro-Leu |
| peptidylarginine deiminase (PAD) | Porphyromonas gingivalis | N(omega)-hydroxy-L-arginine | 0.0046 | 1.5 | 0.003 | pH 9.5, 37 °C | Open record: peptidylarginine deiminase (PAD), N(omega)-hydroxy-L-arginine |
| peptidylarginine deiminase (PAD) | Porphyromonas gingivalis | N-alpha-benzoyl-L-arginineTable 2 | 0.12 | — | — | pH 9.5, 37 °C | Open record: peptidylarginine deiminase (PAD), N-alpha-benzoyl-L-arginine |
| peptidylarginine deiminase (PAD) | Porphyromonas gingivalis | N-alpha-benzoyl-L-argininein the text | — | 0.01 | — | pH 9.5, 37 °C | Open record: peptidylarginine deiminase (PAD), N-alpha-benzoyl-L-arginine |
| peptidylarginine deiminase (PAD) | Porphyromonas gingivalis | N-alpha-benzoyl-L-arginine ethyl ester | 0.019 | 18 | 9.9 × 10⁻⁴ | pH 9.5, 37 °C | Open record: peptidylarginine deiminase (PAD), N-alpha-benzoyl-L-arginine ethyl ester |
| peptidylarginine deiminase (PAD) | Porphyromonas gingivalis | Pro-Arg-Phe | 0.0075 | 0.07 | 0.11 | pH 9.5, 37 °C | Open record: peptidylarginine deiminase (PAD), Pro-Arg-Phe |
| peptidylarginine deiminase (PAD) | Porphyromonas gingivalis | Pro-Phe-Arg | 0.17 | 0.089 | 1.9 | pH 9.5, 37 °C | Open record: peptidylarginine deiminase (PAD), Pro-Phe-Arg |