Values CatLog read from this paper

Crystal structures of rice (Oryza sativa) glyceraldehyde-3-phosphate dehydrogenase complexes with NAD and sulfate suggest involvement of Phe37 in NAD binding for catalysis

PMID 22903596doi:10.1007/s11103-012-9953-7Open in Browse

The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.

CatLog read 16 records (24 values) from this paper: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH) from Oryza sativa.

Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks. CatLog calculated the 8 kcat/Km values marked “calc.” from kcat and Km; no printed kcat/Km was read for those records.

EC 1.2.1.12

Records read from this paper
Enzyme	Organism	Substrate	k_cat (s⁻¹)	K_m (mM)	k_cat/K_m (mM⁻¹ s⁻¹)	Conditions	Open record
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)	Oryza sativa	1,3-bisphosphoglycerate	73.56	0.036	2.0 × 10³ calc.	pH 7.6, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH), 1,3-bisphosphoglycerate
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)	Oryza sativa	D-glyceraldehyde 3-phosphate	122.2	0.111	1.10 × 10³ calc.	pH 8.8, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH), D-glyceraldehyde 3-phosphate
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)	Oryza sativa	NAD+ (oxidized nicotinamide adenine dinucleotide)	—	0.059	—	pH 8.8, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH), NAD+ (oxidized nicotinamide adenine dinucleotide)
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)	Oryza sativa	NADH (reduced nicotinamide adenine dinucleotide)	—	0.061	—	pH 7.6, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH), NADH (reduced nicotinamide adenine dinucleotide)
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)variant F37G	Oryza sativa	1,3-bisphosphoglycerate	0.14	0.051	2.7 calc.	pH 7.6, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH) variant F37G, 1,3-bisphosphoglycerate
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)variant F37G	Oryza sativa	D-glyceraldehyde 3-phosphate	0.24	0.156	1.5 calc.	pH 8.8, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH) variant F37G, D-glyceraldehyde 3-phosphate
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)variant F37G	Oryza sativa	NAD+ (oxidized nicotinamide adenine dinucleotide)	—	0.362	—	pH 8.8, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH) variant F37G, NAD+ (oxidized nicotinamide adenine dinucleotide)
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)variant F37G	Oryza sativa	NADH (reduced nicotinamide adenine dinucleotide)	—	0.367	—	pH 7.6, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH) variant F37G, NADH (reduced nicotinamide adenine dinucleotide)
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)variant F37L	Oryza sativa	1,3-bisphosphoglycerate	0.06	0.049	1.2 calc.	pH 7.6, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH) variant F37L, 1,3-bisphosphoglycerate
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)variant F37L	Oryza sativa	D-glyceraldehyde 3-phosphate	0.09	0.149	0.60 calc.	pH 8.8, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH) variant F37L, D-glyceraldehyde 3-phosphate
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)variant F37L	Oryza sativa	NAD+ (oxidized nicotinamide adenine dinucleotide)	—	0.527	—	pH 8.8, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH) variant F37L, NAD+ (oxidized nicotinamide adenine dinucleotide)
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)variant F37L	Oryza sativa	NADH (reduced nicotinamide adenine dinucleotide)	—	0.537	—	pH 7.6, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH) variant F37L, NADH (reduced nicotinamide adenine dinucleotide)
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)variant F37T	Oryza sativa	1,3-bisphosphoglycerate	0.08	0.053	1.5 calc.	pH 7.6, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH) variant F37T, 1,3-bisphosphoglycerate
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)variant F37T	Oryza sativa	D-glyceraldehyde 3-phosphate	0.13	0.161	0.81 calc.	pH 8.8, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH) variant F37T, D-glyceraldehyde 3-phosphate
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)variant F37T	Oryza sativa	NAD+ (oxidized nicotinamide adenine dinucleotide)	—	0.417	—	pH 8.8, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH) variant F37T, NAD+ (oxidized nicotinamide adenine dinucleotide)
cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH)variant F37T	Oryza sativa	NADH (reduced nicotinamide adenine dinucleotide)	—	0.403	—	pH 7.6, 25 °C	Open record: cytosolic glyceraldehyde-3-phosphate dehydrogenase (OsGAPDH) variant F37T, NADH (reduced nicotinamide adenine dinucleotide)