Values CatLog read from this paper
Crystal structure of DmdD, a crotonase superfamily enzyme that catalyzes the hydration and hydrolysis of methylthioacryloyl-CoA
PMID 23704947doi:10.1371/journal.pone.0063870Open in Browse
The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.
CatLog read 7 records (13 values) from this paper: DmdD from Ruegeria pomeroyi.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks. CatLog calculated the 6 kcat/Km values marked “calc.” from kcat and Km; no printed kcat/Km was read for those records.
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| DmdD | Ruegeria pomeroyi | 3-hydroxybutyryl-CoA | 13.2 | 0.119 | 111 calc. | pH 7.4 | Open record: DmdD, 3-hydroxybutyryl-CoA |
| DmdD | Ruegeria pomeroyi | 3-methylmercaptopropionate-CoA | 0.9 | 0.069 | 13 calc. | pH 7.4 | Open record: DmdD, 3-methylmercaptopropionate-CoA |
| DmdD | Ruegeria pomeroyi | Crotonyl-CoA | 42 | 0.019 | 2.2 × 10³ calc. | pH 7.4 | Open record: DmdD, Crotonyl-CoA |
| DmdD | Ruegeria pomeroyi | methylthioacryloyl-CoACoA ester hydrolysis (CoA release measured by HPLC); Table 2 | 44 | 0.0082 | 5.4 × 10³ calc. | pH 7.4 | Open record: DmdD, methylthioacryloyl-CoA |
| DmdD | Ruegeria pomeroyi | methylthioacryloyl-CoATable 2 | 47 | 0.0094 | 5.0 × 10³ calc. | pH 7.4 | Open record: DmdD, methylthioacryloyl-CoA |
| DmdD | Ruegeria pomeroyi | methylthioacryloyl-CoAin the text | — | — | 5 × 10³ | pH 7.4 | Open record: DmdD, methylthioacryloyl-CoA |
| DmdDvariant E141A | Ruegeria pomeroyi | methylthioacryloyl-CoA | 0.0036 | 0.0633 | 0.057 calc. | pH 7.4 | Open record: DmdD variant E141A, methylthioacryloyl-CoA |