Values CatLog read from this paper
Discovery of a novel L-lyxonate degradation pathway in Pseudomonas aeruginosa PAO1
PMID 24831290doi:10.1021/bi5004298Open in Browse
The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.
CatLog read 13 records (31 values) from this paper: L-lyxonate dehydratase (LyxD), 2-keto-3-deoxy-L-lyxonate dehydratase (L-KdlD-FAH), 2-keto-3-deoxy-L-lyxonate dehydratase (L-KdlD-DHDPS) and 1 more from Dinoroseobacter shibae, Verminephrobacter eiseniae, Pseudomonas aeruginosa and 2 more.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks.
EC 1.2.1.26, EC 4.2.1.43, EC 4.2.1.176
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| 2-keto-3-deoxy-L-lyxonate dehydratase (L-KdlD-DHDPS) | Labrenzia aggregata | 2-keto-3-deoxy-L-lyxonate | 2 | 0.07 | 30 | pH 7.5 | Open record: 2-keto-3-deoxy-L-lyxonate dehydratase (L-KdlD-DHDPS), 2-keto-3-deoxy-L-lyxonate |
| 2-keto-3-deoxy-L-lyxonate dehydratase (L-KdlD-FAH) | Agrobacterium tumefaciens | 2-keto-3-deoxy-L-lyxonate | 80 | 0.2 | 400 | pH 7.5 | Open record: 2-keto-3-deoxy-L-lyxonate dehydratase (L-KdlD-FAH), 2-keto-3-deoxy-L-lyxonate |
| 2-keto-3-deoxy-L-lyxonate dehydratase (L-KdlD-FAH) | Pseudomonas aeruginosa | 2-keto-3-deoxy-L-lyxonate | 5 | 0.2 | 30 | pH 7.5 | Open record: 2-keto-3-deoxy-L-lyxonate dehydratase (L-KdlD-FAH), 2-keto-3-deoxy-L-lyxonate |
| L-lyxonate dehydratase (LyxD) | Dinoroseobacter shibae | D-gulonate | 3 | 1 | 3 | pH 7.5 | Open record: L-lyxonate dehydratase (LyxD), D-gulonate |
| L-lyxonate dehydratase (LyxD) | Dinoroseobacter shibae | L-lyxonate | 2 | 0.2 | 10 | pH 7.5 | Open record: L-lyxonate dehydratase (LyxD), L-lyxonate |
| L-lyxonate dehydratase (LyxD) | Dinoroseobacter shibae | L-mannonate | — | — | 4 × 10⁻⁵ | pH 7.5 | Open record: L-lyxonate dehydratase (LyxD), L-mannonate |
| L-lyxonate dehydratase (LyxD)variant H316Q | Dinoroseobacter shibae | L-lyxonate | — | — | 8 × 10⁻⁵ | pH 7.5 | Open record: L-lyxonate dehydratase (LyxD) variant H316Q, L-lyxonate |
| L-lyxonate dehydratase (LyxD)variant R179Q | Dinoroseobacter shibae | L-lyxonate | — | — | 1 × 10⁻⁵ | pH 7.5 | Open record: L-lyxonate dehydratase (LyxD) variant R179Q, L-lyxonate |
| L-lyxonate dehydratase (LyxD)variant Y216F | Dinoroseobacter shibae | L-lyxonate | 2 | 0.2 | 10 | pH 7.5 | Open record: L-lyxonate dehydratase (LyxD) variant Y216F, L-lyxonate |
| L-lyxonate dehydratase (LyxD) | Verminephrobacter eiseniae | D-gulonate | 2 | 1 | 2 | pH 7.5 | Open record: L-lyxonate dehydratase (LyxD), D-gulonate |
| L-lyxonate dehydratase (LyxD) | Verminephrobacter eiseniae | L-lyxonate | 3 | 0.4 | 8 | pH 7.5 | Open record: L-lyxonate dehydratase (LyxD), L-lyxonate |
| L-lyxonate dehydratase (LyxD) | Verminephrobacter eiseniae | L-mannonate | — | — | 8 × 10⁻⁵ | pH 7.5 | Open record: L-lyxonate dehydratase (LyxD), L-mannonate |
| α-ketoglutarate semialdehyde dehydrogenase (αKGSDH) | Pseudomonas aeruginosa | α-ketoglutarate semialdehyde | 2 | 0.05 | 400 | pH 7.5 | Open record: α-ketoglutarate semialdehyde dehydrogenase (αKGSDH), α-ketoglutarate semialdehyde |