Values CatLog read from this paper
Bacterial Anabaena variabilis phenylalanine ammonia lyase: a biocatalyst with broad substrate specificity
PMID 25037641doi:10.1016/j.bmc.2014.06.035Open in Browse
The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.
CatLog read 32 records (72 values) from this paper: phenylalanine ammonia lyase (AvPAL), phenylalanine ammonia lyase (PcPAL), phenylalanine ammonia lyase (RgPAL) from Anabaena variabilis, Petroselinum crispum, Rhodotorula glutinis.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks. CatLog calculated the 24 kcat/Km values marked “calc.” from kcat and Km; no printed kcat/Km was read for those records.
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | (E)-3-(pyridin-3-yl)acrylic acid | 0.14 | 0.39 | 0.36 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), (E)-3-(pyridin-3-yl)acrylic acid |
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | (E)-3-(pyridin-4-yl)acrylic acid | 1.06 | 0.38 | 2.8 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), (E)-3-(pyridin-4-yl)acrylic acid |
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | (E)-3-fluorocinnamic acid | 0.08 | 0.07 | 1.1 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), (E)-3-fluorocinnamic acid |
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | (E)-3-hydroxycinnamic acid | 0.61 | 3.3 | 0.18 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), (E)-3-hydroxycinnamic acid |
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | (E)-4-(trifluoromethyl)cinnamic acid | 3.14 | 1.51 | 2.08 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), (E)-4-(trifluoromethyl)cinnamic acid |
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | (E)-4-fluorocinnamic acid | 0.09 | 0.12 | 0.75 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), (E)-4-fluorocinnamic acid |
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | (E)-4-nitrocinnamic acid | 3.81 | 0.66 | 5.8 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), (E)-4-nitrocinnamic acid |
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | (E)-cinnamic acid | 0.03 | 0.03 | 1.0 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), (E)-cinnamic acid |
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | 3-(pyridin-3-yl)-L-alanine | 0.91 | 3.39 | 0.27 | pH 8.3, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), 3-(pyridin-3-yl)-L-alanine |
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | 3-(pyridin-4-yl)-L-alanine | 0.61 | 0.48 | 1.27 | pH 8.3, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), 3-(pyridin-4-yl)-L-alanine |
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | 3-fluoro-L-phenylalanine | 1.1 | 0.75 | 1.47 | pH 8.3, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), 3-fluoro-L-phenylalanine |
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | 3-hydroxy-L-phenylalanine | 0.89 | 1.11 | 0.8 | pH 8.3, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), 3-hydroxy-L-phenylalanine |
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | 4-(trifluoromethyl)-L-phenylalanine | 0.82 | 1.05 | 0.78 | pH 8.3, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), 4-(trifluoromethyl)-L-phenylalanine |
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | 4-fluoro-L-phenylalanine | 1.06 | 0.56 | 1.89 | pH 8.3, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), 4-fluoro-L-phenylalanine |
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | 4-nitro-L-phenylalanine | 1.08 | 0.23 | 4.7 | pH 8.3, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), 4-nitro-L-phenylalanine |
| phenylalanine ammonia lyase (AvPAL) | Anabaena variabilis | L-phenylalanine | 0.49 | 0.29 | 1.69 | pH 8.3, 30 °C | Open record: phenylalanine ammonia lyase (AvPAL), L-phenylalanine |
| phenylalanine ammonia lyase (PcPAL) | Petroselinum crispum | (E)-3-(pyridin-3-yl)acrylic acid | 0.07 | 0.38 | 0.18 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (PcPAL), (E)-3-(pyridin-3-yl)acrylic acid |
| phenylalanine ammonia lyase (PcPAL) | Petroselinum crispum | (E)-3-(pyridin-4-yl)acrylic acid | 0.28 | 1.85 | 0.15 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (PcPAL), (E)-3-(pyridin-4-yl)acrylic acid |
| phenylalanine ammonia lyase (PcPAL) | Petroselinum crispum | (E)-3-fluorocinnamic acid | 0.46 | 0.18 | 2.6 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (PcPAL), (E)-3-fluorocinnamic acid |
| phenylalanine ammonia lyase (PcPAL) | Petroselinum crispum | (E)-3-hydroxycinnamic acid | 0.27 | 0.27 | 1.0 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (PcPAL), (E)-3-hydroxycinnamic acid |
| phenylalanine ammonia lyase (PcPAL) | Petroselinum crispum | (E)-4-(trifluoromethyl)cinnamic acid | 0.06 | 1.85 | 0.032 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (PcPAL), (E)-4-(trifluoromethyl)cinnamic acid |
| phenylalanine ammonia lyase (PcPAL) | Petroselinum crispum | (E)-4-fluorocinnamic acid | 0.25 | 0.25 | 1.0 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (PcPAL), (E)-4-fluorocinnamic acid |
| phenylalanine ammonia lyase (PcPAL) | Petroselinum crispum | (E)-4-nitrocinnamic acid | 0.1 | 3.31 | 0.030 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (PcPAL), (E)-4-nitrocinnamic acid |
| phenylalanine ammonia lyase (PcPAL) | Petroselinum crispum | (E)-cinnamic acid | 0.07 | 0.3 | 0.23 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (PcPAL), (E)-cinnamic acid |
| phenylalanine ammonia lyase (RgPAL) | Rhodotorula glutinis | (E)-3-(pyridin-3-yl)acrylic acid | 0.66 | 1.87 | 0.35 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (RgPAL), (E)-3-(pyridin-3-yl)acrylic acid |
| phenylalanine ammonia lyase (RgPAL) | Rhodotorula glutinis | (E)-3-(pyridin-4-yl)acrylic acid | 0.85 | 1.42 | 0.60 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (RgPAL), (E)-3-(pyridin-4-yl)acrylic acid |
| phenylalanine ammonia lyase (RgPAL) | Rhodotorula glutinis | (E)-3-fluorocinnamic acid | 0.27 | 0.06 | 4.5 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (RgPAL), (E)-3-fluorocinnamic acid |
| phenylalanine ammonia lyase (RgPAL) | Rhodotorula glutinis | (E)-3-hydroxycinnamic acid | 0.18 | 0.3 | 0.60 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (RgPAL), (E)-3-hydroxycinnamic acid |
| phenylalanine ammonia lyase (RgPAL) | Rhodotorula glutinis | (E)-4-(trifluoromethyl)cinnamic acid | 0.05 | 0.39 | 0.13 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (RgPAL), (E)-4-(trifluoromethyl)cinnamic acid |
| phenylalanine ammonia lyase (RgPAL) | Rhodotorula glutinis | (E)-4-fluorocinnamic acid | 0.21 | 0.19 | 1.1 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (RgPAL), (E)-4-fluorocinnamic acid |
| phenylalanine ammonia lyase (RgPAL) | Rhodotorula glutinis | (E)-4-nitrocinnamic acid | 0.17 | 1.86 | 0.091 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (RgPAL), (E)-4-nitrocinnamic acid |
| phenylalanine ammonia lyase (RgPAL) | Rhodotorula glutinis | (E)-cinnamic acid | 0.31 | 0.33 | 0.94 calc. | pH 9.5, 30 °C | Open record: phenylalanine ammonia lyase (RgPAL), (E)-cinnamic acid |