CatLogenzyme kinetics catalog

Values CatLog read from this paper

Mechanistic insight into 3-methylmercaptopropionate metabolism and kinetical regulation of demethylation pathway in marine dimethylsulfoniopropionate-catabolizing bacteria

PMID 30677184doi:10.1111/mmi.14211Open in Browse

The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.

CatLog read 46 records (46 values) from this paper: DmdB (MMPA-CoA ligase), DmdC (MMPA-CoA dehydrogenase), DmdA (DMSP demethylase) from Ruegeria lacuscaerulensis, Roseovarius nubinhibens, Dinoroseobacter shibae and 2 more.

Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks.

EC 1.3.99.41, EC 6.2.1.44

EnzymeOrganismSubstratekcat (s⁻¹)Km (mM)kcat/Km (mM⁻¹ s⁻¹)Conditions
DmdA (DMSP demethylase)Roseovarius nubinhibensdimethylsulfoniopropionate—35.7—Open
DmdA (DMSP demethylase)Ruegeria lacuscaerulensisdimethylsulfoniopropionate—4.1—Open
DmdB (MMPA-CoA ligase)Dinoroseobacter shibae3-methylmercaptopropionate—0.4—Open
DmdB (MMPA-CoA ligase)Ruegeria lacuscaerulensis3-methylmercaptopropionate—0.2—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)Ruegeria lacuscaerulensis3-methylmercaptopropionate—0.3—Open
DmdB (MMPA-CoA ligase)Ruegeria lacuscaerulensisadenosine triphosphate—0.8—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)Ruegeria lacuscaerulensisadenosine triphosphateapparent Km—5—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)Ruegeria lacuscaerulensiscoenzyme A—0.4—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant D435ARuegeria lacuscaerulensiscoenzyme A—1.7—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant E442ARuegeria lacuscaerulensiscoenzyme A—6—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant E474ARuegeria lacuscaerulensiscoenzyme A—5.1—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant G302PRuegeria lacuscaerulensis3-methylmercaptopropionate—58—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant G303PRuegeria lacuscaerulensisadenosine triphosphate—0.8—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant G440PRuegeria lacuscaerulensiscoenzyme A—10.7—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant G441PRuegeria lacuscaerulensiscoenzyme A—3.3—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant H231ARuegeria lacuscaerulensis3-methylmercaptopropionate—4.8—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant H231ARuegeria lacuscaerulensisadenosine triphosphate—3.2—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant H231ARuegeria lacuscaerulensiscoenzyme A—0.4—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant K434ARuegeria lacuscaerulensiscoenzyme A—0.7—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant K438ARuegeria lacuscaerulensiscoenzyme A—5.3—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant K526ARuegeria lacuscaerulensiscoenzyme A—0.6—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant P333ARuegeria lacuscaerulensis3-methylmercaptopropionate—42.2—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant R432ARuegeria lacuscaerulensisadenosine triphosphate—7.1—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant W235ARuegeria lacuscaerulensis3-methylmercaptopropionate—53.3—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant W326ARuegeria lacuscaerulensisadenosine triphosphate—1.1—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)variant W443ARuegeria lacuscaerulensiscoenzyme A—3.2—pH 8, 40 °COpen
DmdB (MMPA-CoA ligase)Ruegeria pomeroyi3-methylmercaptopropionate—1.7—Open
DmdB (MMPA-CoA ligase)Sagittula stellata3-methylmercaptopropionate—0.4—Open
DmdC (MMPA-CoA dehydrogenase)Dinoroseobacter shibae3-methylmercaptopropionyl-CoA—2.7—Open
DmdC (MMPA-CoA dehydrogenase)Roseovarius nubinhibens3-methylmercaptopropionyl-CoA—1.4—pH 9, 40 °COpen
DmdC (MMPA-CoA dehydrogenase)Roseovarius nubinhibens3-methylmercaptopropionyl-CoA—2.2—Open
DmdC (MMPA-CoA dehydrogenase)Roseovarius nubinhibensflavin adenine dinucleotide—0.0063—pH 9, 40 °COpen
DmdC (MMPA-CoA dehydrogenase)variant F287ARoseovarius nubinhibens3-methylmercaptopropionyl-CoA—14.3—pH 9, 40 °COpen
DmdC (MMPA-CoA dehydrogenase)variant H280ARoseovarius nubinhibens3-methylmercaptopropionyl-CoA—2—pH 9, 40 °COpen
DmdC (MMPA-CoA dehydrogenase)variant K223ARoseovarius nubinhibens3-methylmercaptopropionyl-CoA—2—pH 9, 40 °COpen
DmdC (MMPA-CoA dehydrogenase)variant K281ARoseovarius nubinhibens3-methylmercaptopropionyl-CoA—8—pH 9, 40 °COpen
DmdC (MMPA-CoA dehydrogenase)variant M161ARoseovarius nubinhibens3-methylmercaptopropionyl-CoA—6.3—pH 9, 40 °COpen
DmdC (MMPA-CoA dehydrogenase)variant M161ARoseovarius nubinhibensflavin adenine dinucleotide—0.0092—pH 9, 40 °COpen
DmdC (MMPA-CoA dehydrogenase)variant R284ARoseovarius nubinhibens3-methylmercaptopropionyl-CoA—12.4—pH 9, 40 °COpen
DmdC (MMPA-CoA dehydrogenase)variant S197ARoseovarius nubinhibensflavin adenine dinucleotide—0.0648—pH 9, 40 °COpen
DmdC (MMPA-CoA dehydrogenase)variant T170ARoseovarius nubinhibensflavin adenine dinucleotide—0.1125—pH 9, 40 °COpen
DmdC (MMPA-CoA dehydrogenase)variant Y434ARoseovarius nubinhibens3-methylmercaptopropionyl-CoA—1.6—pH 9, 40 °COpen
DmdC (MMPA-CoA dehydrogenase)variant Y434ARoseovarius nubinhibensflavin adenine dinucleotide—0.0299—pH 9, 40 °COpen
DmdC (MMPA-CoA dehydrogenase)Ruegeria lacuscaerulensis3-methylmercaptopropionyl-CoA—3—Open
DmdC (MMPA-CoA dehydrogenase)Ruegeria pomeroyi3-methylmercaptopropionyl-CoA—0.2—Open
DmdC (MMPA-CoA dehydrogenase)Sagittula stellata3-methylmercaptopropionyl-CoA—1.5—Open