Values CatLog read from this paper
Evolution and Functional Diversification of Serine Racemase Homologs in Bacteria
PMID 39821316doi:10.1007/s00239-024-10231-7Open in Browse
The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.
CatLog read 60 records (180 values) from this paper: ArgR (arginine racemase; bacterial SerR homolog), Ser/AsnR (serine/asparagine racemase; bacterial SerR homolog), SerR (serine racemase; bacterial SerR homolog) and 6 more from Acetomicrobium mobile, Thermovirga lienii, Clostridium aceticum and 10 more.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks.
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| ArgR (arginine racemase; bacterial SerR homolog) | Acetomicrobium mobile | D-arginine | 12.1 | 0.616 | 19.7 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-arginine |
| ArgR (arginine racemase; bacterial SerR homolog) | Acetomicrobium mobile | D-histidine | 87.9 | 120 | 0.734 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-histidine |
| ArgR (arginine racemase; bacterial SerR homolog) | Acetomicrobium mobile | D-serine | 9.12 | 106 | 0.0865 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-serine |
| ArgR (arginine racemase; bacterial SerR homolog) | Acetomicrobium mobile | L-arginine | 8.66 | 0.322 | 26.9 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-arginine |
| ArgR (arginine racemase; bacterial SerR homolog) | Acetomicrobium mobile | L-histidine | 22.3 | 37.9 | 0.59 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-histidine |
| ArgR (arginine racemase; bacterial SerR homolog) | Acetomicrobium mobile | L-serine | 1.91 | 22.5 | 0.0855 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-serine |
| ArgR (arginine racemase; bacterial SerR homolog) | Alkaliphilus oremlandii | D-arginine | 21.6 | 0.385 | 56.1 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-arginine |
| ArgR (arginine racemase; bacterial SerR homolog) | Alkaliphilus oremlandii | D-serine | 4.2 | 166 | 0.0252 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-serine |
| ArgR (arginine racemase; bacterial SerR homolog) | Alkaliphilus oremlandii | L-arginine | 49.6 | 0.885 | 53.9 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-arginine |
| ArgR (arginine racemase; bacterial SerR homolog) | Alkaliphilus oremlandii | L-serine | 1.83 | 65.3 | 0.0281 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-serine |
| ArgR (arginine racemase; bacterial SerR homolog) | Anaerovirgula multivorans | D-arginine | 40.5 | 0.419 | 96.8 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-arginine |
| ArgR (arginine racemase; bacterial SerR homolog) | Anaerovirgula multivorans | D-serine | 20 | 339 | 0.059 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-serine |
| ArgR (arginine racemase; bacterial SerR homolog) | Anaerovirgula multivorans | L-arginine | 34.1 | 0.321 | 106 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-arginine |
| ArgR (arginine racemase; bacterial SerR homolog) | Anaerovirgula multivorans | L-serine | 2.59 | 68.6 | 0.0378 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-serine |
| ArgR (arginine racemase; bacterial SerR homolog) | Clostridium aceticum | D-arginine | 5.8 | 0.219 | 26.5 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-arginine |
| ArgR (arginine racemase; bacterial SerR homolog) | Clostridium aceticum | D-histidine | 1.64 | 45.5 | 0.0356 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-histidine |
| ArgR (arginine racemase; bacterial SerR homolog) | Clostridium aceticum | D-serine | 7.33 | 43.2 | 0.169 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-serine |
| ArgR (arginine racemase; bacterial SerR homolog) | Clostridium aceticum | L-arginine | 5.86 | 0.167 | 35.2 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-arginine |
| ArgR (arginine racemase; bacterial SerR homolog) | Clostridium aceticum | L-histidine | 0.651 | 17.4 | 0.0376 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-histidine |
| ArgR (arginine racemase; bacterial SerR homolog) | Clostridium aceticum | L-serine | 1.56 | 13.9 | 0.112 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-serine |
| ArgR (arginine racemase; bacterial SerR homolog) | Liquorilactobacillus hordei | D-arginine | 53.6 | 0.19 | 283 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-arginine |
| ArgR (arginine racemase; bacterial SerR homolog) | Liquorilactobacillus hordei | D-serine | 14.9 | 344 | 0.0435 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-serine |
| ArgR (arginine racemase; bacterial SerR homolog) | Liquorilactobacillus hordei | L-arginine | 43.8 | 0.177 | 249 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-arginine |
| ArgR (arginine racemase; bacterial SerR homolog) | Liquorilactobacillus hordei | L-serine | 2.73 | 64.4 | 0.0425 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-serine |
| ArgR (arginine racemase; bacterial SerR homolog) | Parafannyhessea umbonata | D-arginine | 33.1 | 0.474 | 69.7 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-arginine |
| ArgR (arginine racemase; bacterial SerR homolog) | Parafannyhessea umbonata | D-serine | 15.6 | 407 | 0.0385 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-serine |
| ArgR (arginine racemase; bacterial SerR homolog) | Parafannyhessea umbonata | L-arginine | 57.2 | 0.622 | 91.9 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-arginine |
| ArgR (arginine racemase; bacterial SerR homolog) | Parafannyhessea umbonata | L-serine | 4.56 | 117 | 0.0391 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-serine |
| ArgR (arginine racemase; bacterial SerR homolog) | Thermovirga lienii | D-arginine | 42.4 | 0.948 | 44.7 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-arginine |
| ArgR (arginine racemase; bacterial SerR homolog) | Thermovirga lienii | D-serine | 8.14 | 157 | 0.0523 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), D-serine |
| ArgR (arginine racemase; bacterial SerR homolog) | Thermovirga lienii | L-arginine | 61.5 | 0.851 | 72.3 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-arginine |
| ArgR (arginine racemase; bacterial SerR homolog) | Thermovirga lienii | L-serine | 1.27 | 24.1 | 0.0528 | pH 8, 30 °C | Open record: ArgR (arginine racemase; bacterial SerR homolog), L-serine |
| AspR (aspartate racemase; bacterial SerR homolog) | Salinispora arenicola | D-aspartate | 0.14 | 1.35 | 0.104 | pH 8, 30 °C | Open record: AspR (aspartate racemase; bacterial SerR homolog), D-aspartate |
| AspR (aspartate racemase; bacterial SerR homolog) | Salinispora arenicola | L-aspartate | 0.615 | 5.35 | 0.115 | pH 8, 30 °C | Open record: AspR (aspartate racemase; bacterial SerR homolog), L-aspartate |
| SDH (serine dehydratase; bacterial SerR homolog) | Caldilinea aerophila | L-serine | 3.45 | 51.4 | 0.0676 | pH 8, 30 °C | Open record: SDH (serine dehydratase; bacterial SerR homolog), L-serine |
| SDH (serine dehydratase; bacterial SerR homolog) | Clostridium aceticum | L-serine | 2.09 | 78.4 | 0.0267 | pH 8, 30 °C | Open record: SDH (serine dehydratase; bacterial SerR homolog), L-serine |
| SDH (serine dehydratase; bacterial SerR homolog) | Priestia megaterium | L-serine | 0.232 | 2.24 | 0.106 | pH 8, 30 °C | Open record: SDH (serine dehydratase; bacterial SerR homolog), L-serine |
| SDH (serine dehydratase; bacterial SerR homolog) | Streptomyces hygroscopicus | L-serine | 2.31 | 54.3 | 0.0428 | pH 8, 30 °C | Open record: SDH (serine dehydratase; bacterial SerR homolog), L-serine |
| SDH1 (serine dehydratase 1; bacterial SerR homolog) | Pseudomonas chlororaphis | L-serine | 71.2 | 32.8 | 2.18 | pH 8, 30 °C | Open record: SDH1 (serine dehydratase 1; bacterial SerR homolog), L-serine |
| SDH2 (serine dehydratase 2; bacterial SerR homolog) | Pseudomonas chlororaphis | L-serine | 29.4 | 27.9 | 1.07 | pH 8, 30 °C | Open record: SDH2 (serine dehydratase 2; bacterial SerR homolog), L-serine |
| Ser/ArgR (serine/arginine racemase; bacterial SerR homolog) | Thermovirga lienii | D-arginine | 0.344 | 0.478 | 0.727 | pH 8, 30 °C | Open record: Ser/ArgR (serine/arginine racemase; bacterial SerR homolog), D-arginine |
| Ser/ArgR (serine/arginine racemase; bacterial SerR homolog) | Thermovirga lienii | D-serine | 4.28 | 101 | 0.0431 | pH 8, 30 °C | Open record: Ser/ArgR (serine/arginine racemase; bacterial SerR homolog), D-serine |
| Ser/ArgR (serine/arginine racemase; bacterial SerR homolog) | Thermovirga lienii | L-arginine | 0.115 | 0.155 | 0.743 | pH 8, 30 °C | Open record: Ser/ArgR (serine/arginine racemase; bacterial SerR homolog), L-arginine |
| Ser/ArgR (serine/arginine racemase; bacterial SerR homolog) | Thermovirga lienii | L-serine | 1.82 | 41.4 | 0.0445 | pH 8, 30 °C | Open record: Ser/ArgR (serine/arginine racemase; bacterial SerR homolog), L-serine |
| Ser/AsnR (serine/asparagine racemase; bacterial SerR homolog) | Caldilinea aerophila | D-asparagine | 0.63 | 21.3 | 0.0295 | pH 8, 30 °C | Open record: Ser/AsnR (serine/asparagine racemase; bacterial SerR homolog), D-asparagine |
| Ser/AsnR (serine/asparagine racemase; bacterial SerR homolog) | Caldilinea aerophila | D-serinereaction: D-Ser to L-Ser (racemization) | 0.703 | 23.3 | 0.0305 | pH 8, 30 °C | Open record: Ser/AsnR (serine/asparagine racemase; bacterial SerR homolog), D-serine |
| Ser/AsnR (serine/asparagine racemase; bacterial SerR homolog) | Caldilinea aerophila | D-serine | 0.179 | 3.26 | 0.0553 | pH 8, 30 °C | Open record: Ser/AsnR (serine/asparagine racemase; bacterial SerR homolog), D-serine |
| Ser/AsnR (serine/asparagine racemase; bacterial SerR homolog) | Caldilinea aerophila | L-asparagine | 0.677 | 31.1 | 0.0218 | pH 8, 30 °C | Open record: Ser/AsnR (serine/asparagine racemase; bacterial SerR homolog), L-asparagine |
| Ser/AsnR (serine/asparagine racemase; bacterial SerR homolog) | Caldilinea aerophila | L-serinereaction: L-Ser to D-Ser (racemization) | 0.395 | 11.4 | 0.0348 | pH 8, 30 °C | Open record: Ser/AsnR (serine/asparagine racemase; bacterial SerR homolog), L-serine |
| Ser/AsnR (serine/asparagine racemase; bacterial SerR homolog) | Caldilinea aerophila | L-serine | 1.47 | 2.78 | 0.528 | pH 8, 30 °C | Open record: Ser/AsnR (serine/asparagine racemase; bacterial SerR homolog), L-serine |
| Ser/AspR (serine/aspartate racemase; bacterial SerR homolog) | Pseudomonas chlororaphis | D-aspartate | 0.134 | 21.1 | 0.00641 | pH 8, 30 °C | Open record: Ser/AspR (serine/aspartate racemase; bacterial SerR homolog), D-aspartate |
| Ser/AspR (serine/aspartate racemase; bacterial SerR homolog) | Pseudomonas chlororaphis | D-serine | 0.28 | 36.6 | 0.00769 | pH 8, 30 °C | Open record: Ser/AspR (serine/aspartate racemase; bacterial SerR homolog), D-serine |
| Ser/AspR (serine/aspartate racemase; bacterial SerR homolog) | Pseudomonas chlororaphis | L-aspartate | 0.0554 | 7.73 | 0.00711 | pH 8, 30 °C | Open record: Ser/AspR (serine/aspartate racemase; bacterial SerR homolog), L-aspartate |
| Ser/AspR (serine/aspartate racemase; bacterial SerR homolog) | Pseudomonas chlororaphis | L-serine | 0.207 | 28.9 | 0.00713 | pH 8, 30 °C | Open record: Ser/AspR (serine/aspartate racemase; bacterial SerR homolog), L-serine |
| SerR (serine racemase; bacterial SerR homolog) | Acetomicrobium mobile | D-serine | 0.279 | 22.8 | 0.0122 | pH 8, 30 °C | Open record: SerR (serine racemase; bacterial SerR homolog), D-serine |
| SerR (serine racemase; bacterial SerR homolog) | Acetomicrobium mobile | L-serine | 0.0845 | 5.44 | 0.0156 | pH 8, 30 °C | Open record: SerR (serine racemase; bacterial SerR homolog), L-serine |
| SerR (serine racemase; bacterial SerR homolog) | Dethiosulfatibacter aminovorans | D-serine | 1.08 | 255 | 0.00423 | pH 8, 30 °C | Open record: SerR (serine racemase; bacterial SerR homolog), D-serine |
| SerR (serine racemase; bacterial SerR homolog) | Dethiosulfatibacter aminovorans | L-serine | 0.0916 | 26 | 0.00358 | pH 8, 30 °C | Open record: SerR (serine racemase; bacterial SerR homolog), L-serine |
| SerR (serine racemase; bacterial SerR homolog) | Streptomyces hygroscopicus | D-serine | 0.126 | 23.8 | 0.00538 | pH 8, 30 °C | Open record: SerR (serine racemase; bacterial SerR homolog), D-serine |
| SerR (serine racemase; bacterial SerR homolog) | Streptomyces hygroscopicus | L-serine | 0.173 | 33.6 | 0.00518 | pH 8, 30 °C | Open record: SerR (serine racemase; bacterial SerR homolog), L-serine |