Values CatLog read from this paper
Inter-domain communication in the dimeric DEAD-box helicase Hera from T. thermophilus and implications for the mechanism of RNA unwinding
PMID 39995044doi:10.1093/nar/gkaf080Open in Browse
The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.
CatLog read 20 records (20 values) from this paper: Hera (DEAD-box RNA helicase) from Thermus thermophilus.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks.
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| Hera (DEAD-box RNA helicase) | Thermus thermophilus | adenosine 5'-triphosphate | 2.3 | — | — | pH 7.5, 37 °C | Open record: Hera (DEAD-box RNA helicase), adenosine 5'-triphosphate |
| Hera (DEAD-box RNA helicase) | Thermus thermophilus | adenosine 5'-triphosphate | 1.2 | — | — | pH 7.5, 37 °C | Open record: Hera (DEAD-box RNA helicase), adenosine 5'-triphosphate |
| Hera (DEAD-box RNA helicase) | Thermus thermophilus | Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA | 0.062 | — | — | pH 7.5, 25 °C | Open record: Hera (DEAD-box RNA helicase), Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA |
| Hera (DEAD-box RNA helicase)variant Hera/Hera_1–419 heterodimer (one RBD) | Thermus thermophilus | adenosine 5'-triphosphate | 1 | — | — | pH 7.5, 37 °C | Open record: Hera (DEAD-box RNA helicase) variant Hera/Hera_1–419 heterodimer (one RBD), adenosine 5'-triphosphate |
| Hera (DEAD-box RNA helicase)variant Hera/Hera_1–419 heterodimer (one RBD) | Thermus thermophilus | adenosine 5'-triphosphate | 0.48 | — | — | pH 7.5, 37 °C | Open record: Hera (DEAD-box RNA helicase) variant Hera/Hera_1–419 heterodimer (one RBD), adenosine 5'-triphosphate |
| Hera (DEAD-box RNA helicase)variant Hera/Hera_1–419 heterodimer (one RBD) | Thermus thermophilus | Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA | 0.016 | — | — | pH 7.5, 25 °C | Open record: Hera (DEAD-box RNA helicase) variant Hera/Hera_1–419 heterodimer (one RBD), Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA |
| Hera (DEAD-box RNA helicase)variant Hera_1–365 (monomeric core) | Thermus thermophilus | Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA | 0.0016 | — | — | pH 7.5, 25 °C | Open record: Hera (DEAD-box RNA helicase) variant Hera_1–365 (monomeric core), Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA |
| Hera (DEAD-box RNA helicase)variant Hera_1–419 (no RBD) | Thermus thermophilus | adenosine 5'-triphosphate | 0.9 | — | — | pH 7.5, 37 °C | Open record: Hera (DEAD-box RNA helicase) variant Hera_1–419 (no RBD), adenosine 5'-triphosphate |
| Hera (DEAD-box RNA helicase)variant Hera_1–419 (no RBD) | Thermus thermophilus | adenosine 5'-triphosphate | 0.5 | — | — | pH 7.5, 37 °C | Open record: Hera (DEAD-box RNA helicase) variant Hera_1–419 (no RBD), adenosine 5'-triphosphate |
| Hera (DEAD-box RNA helicase)variant Hera_1–419 (no RBD) | Thermus thermophilus | Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA | 0.0062 | — | — | pH 7.5, 25 °C | Open record: Hera (DEAD-box RNA helicase) variant Hera_1–419 (no RBD), Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA |
| Hera (DEAD-box RNA helicase)variant K51Q in one protomer (Hera/Hera_K51Q heterodimer) | Thermus thermophilus | adenosine 5'-triphosphate | 1.19 | — | — | pH 7.5, 37 °C | Open record: Hera (DEAD-box RNA helicase) variant K51Q in one protomer (Hera/Hera_K51Q heterodimer), adenosine 5'-triphosphate |
| Hera (DEAD-box RNA helicase)variant K51Q in one protomer (Hera/Hera_K51Q heterodimer) | Thermus thermophilus | Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA | 0.019 | — | — | pH 7.5, 25 °C | Open record: Hera (DEAD-box RNA helicase) variant K51Q in one protomer (Hera/Hera_K51Q heterodimer), Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA |
| Hera (DEAD-box RNA helicase)variant cis-heterodimer (Hera/Hera_208–419) | Thermus thermophilus | adenosine 5'-triphosphate | 1.2 | — | — | pH 7.5, 37 °C | Open record: Hera (DEAD-box RNA helicase) variant cis-heterodimer (Hera/Hera_208–419), adenosine 5'-triphosphate |
| Hera (DEAD-box RNA helicase)variant cis-heterodimer (Hera/Hera_208–419) | Thermus thermophilus | Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA | 0.015 | — | — | pH 7.5, 25 °C | Open record: Hera (DEAD-box RNA helicase) variant cis-heterodimer (Hera/Hera_208–419), Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA |
| Hera (DEAD-box RNA helicase)variant cis-like heterodimer (Hera/Hera_1–419_K51Q; K51Q in the Hera_1–419 protomer) | Thermus thermophilus | adenosine 5'-triphosphate | 0.3 | — | — | pH 7.5, 37 °C | Open record: Hera (DEAD-box RNA helicase) variant cis-like heterodimer (Hera/Hera_1–419_K51Q; K51Q in the Hera_1–419 protomer), adenosine 5'-triphosphate |
| Hera (DEAD-box RNA helicase)variant cis-like heterodimer (Hera/Hera_1–419_K51Q; K51Q in the Hera_1–419 protomer) | Thermus thermophilus | Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA | 0.012 | — | — | pH 7.5, 25 °C | Open record: Hera (DEAD-box RNA helicase) variant cis-like heterodimer (Hera/Hera_1–419_K51Q; K51Q in the Hera_1–419 protomer), Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA |
| Hera (DEAD-box RNA helicase)variant trans-heterodimer (Hera_1–419/Hera_370–510) | Thermus thermophilus | adenosine 5'-triphosphate | 1.9 | — | — | pH 7.5, 37 °C | Open record: Hera (DEAD-box RNA helicase) variant trans-heterodimer (Hera_1–419/Hera_370–510), adenosine 5'-triphosphate |
| Hera (DEAD-box RNA helicase)variant trans-heterodimer (Hera_1–419/Hera_370–510) | Thermus thermophilus | Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA | 0.022 | — | — | pH 7.5, 25 °C | Open record: Hera (DEAD-box RNA helicase) variant trans-heterodimer (Hera_1–419/Hera_370–510), Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA |
| Hera (DEAD-box RNA helicase)variant trans-like heterodimer (Hera_1–419/Hera_K51Q; K51Q in the full-length protomer) | Thermus thermophilus | adenosine 5'-triphosphate | 0.7 | — | — | pH 7.5, 37 °C | Open record: Hera (DEAD-box RNA helicase) variant trans-like heterodimer (Hera_1–419/Hera_K51Q; K51Q in the full-length protomer), adenosine 5'-triphosphate |
| Hera (DEAD-box RNA helicase)variant trans-like heterodimer (Hera_1–419/Hera_K51Q; K51Q in the full-length protomer) | Thermus thermophilus | Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA | 0.009 | — | — | pH 7.5, 25 °C | Open record: Hera (DEAD-box RNA helicase) variant trans-like heterodimer (Hera_1–419/Hera_K51Q; K51Q in the full-length protomer), Cy5-labeled 32mer RNA (hairpin 92 of 23S rRNA) annealed to the 3'-Cy3-labeled 9mer RNA |