CatLogenzyme kinetics catalog

EC 1.13.11.8: protocatechuate 4,5-dioxygenase

OxidoreductasesOpen in Browse

CatLog read 23 records for EC 1.13.11.8 from 2 papers, for 2 organisms. Names in these papers: protocatechuate 4,5-dioxygenase (LigAB), LigAB (protocatechuate 4,5-dioxygenase).

Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units.

CatLog also holds 4 records for EC 1.13.11.8 that are not yet re-read: from its earlier version, built from the enzyme databases and partly checked against the papers. All records for EC 1.13.11.8 in Browse.

Papers

PaperOrganismsRecords
doi:10.1016/j.procbio.2015.05.024Sphingobium sp. strain SYK-615
Exploring allosteric activation of LigAB from Sphingobium sp. strain SYK-6 through kinetics, mutagenesis and computational studiesSphingobium sp. SYK-68

Records

EnzymeOrganismSubstratekcat (s⁻¹)Km (mM)kcat/Km (mM⁻¹ s⁻¹)ConditionsPaper
LigAB (protocatechuate 4,5-dioxygenase)Sphingobium sp. SYK-6protocatechuateno effector1780.0812.2 × 10³pH 7.5, 25 °CPMID 25562402Open
LigAB (protocatechuate 4,5-dioxygenase)Sphingobium sp. SYK-6protocatechuatewith 5 mM vanillin (allosteric activator)2300.131.8 × 10³pH 7.5, 25 °CPMID 25562402Open
LigAB (protocatechuate 4,5-dioxygenase)variant A18WSphingobium sp. SYK-6protocatechuate1220.0661.9 × 10³pH 7.5, 25 °CPMID 25562402Open
LigAB (protocatechuate 4,5-dioxygenase)variant F103HSphingobium sp. SYK-6protocatechuate1100.1081.1 × 10³pH 7.5, 25 °CPMID 25562402Open
LigAB (protocatechuate 4,5-dioxygenase)variant F103LSphingobium sp. SYK-6protocatechuate331.621pH 7.5, 25 °CPMID 25562402Open
LigAB (protocatechuate 4,5-dioxygenase)variant F103TSphingobium sp. SYK-6protocatechuate1120.21530pH 7.5, 25 °CPMID 25562402Open
LigAB (protocatechuate 4,5-dioxygenase)variant F103VSphingobium sp. SYK-6dioxygen—0.094—pH 7.5PMID 25562402Open
LigAB (protocatechuate 4,5-dioxygenase)variant F103VSphingobium sp. SYK-6protocatechuate890.26340pH 7.5, 25 °CPMID 25562402Open
protocatechuate 4,5-dioxygenase (LigAB)Sphingobium sp. strain SYK-63-O-methyl gallate7.32.33.13pH 7.5, 25 °Cdoi:10.1016/j.procbio.2015.05.024Open
protocatechuate 4,5-dioxygenase (LigAB)Sphingobium sp. strain SYK-6gallate530.44121pH 7.5, 25 °Cdoi:10.1016/j.procbio.2015.05.024Open
protocatechuate 4,5-dioxygenase (LigAB)Sphingobium sp. strain SYK-6protocatechuic acid2160.0514.26 × 10³pH 7.5, 25 °Cdoi:10.1016/j.procbio.2015.05.024Open
protocatechuate 4,5-dioxygenase (LigAB)variant F103HSphingobium sp. strain SYK-63-O-methyl gallate910.9398.3pH 7.5, 25 °Cdoi:10.1016/j.procbio.2015.05.024Open
protocatechuate 4,5-dioxygenase (LigAB)variant F103HSphingobium sp. strain SYK-6gallate410.19214pH 7.5, 25 °Cdoi:10.1016/j.procbio.2015.05.024Open
protocatechuate 4,5-dioxygenase (LigAB)variant F103HSphingobium sp. strain SYK-6protocatechuic acid1100.1081.02 × 10³pH 7.5, 25 °Cdoi:10.1016/j.procbio.2015.05.024Open
protocatechuate 4,5-dioxygenase (LigAB)variant F103LSphingobium sp. strain SYK-63-O-methyl gallate741.78pH 7.5, 25 °Cdoi:10.1016/j.procbio.2015.05.024Open
protocatechuate 4,5-dioxygenase (LigAB)variant F103LSphingobium sp. strain SYK-6gallate570.726pH 7.5, 25 °Cdoi:10.1016/j.procbio.2015.05.024Open
protocatechuate 4,5-dioxygenase (LigAB)variant F103LSphingobium sp. strain SYK-6protocatechuic acid331.620.7pH 7.5, 25 °Cdoi:10.1016/j.procbio.2015.05.024Open
protocatechuate 4,5-dioxygenase (LigAB)variant F103TSphingobium sp. strain SYK-63-O-methyl gallate15.10.3938.5pH 7.5, 25 °Cdoi:10.1016/j.procbio.2015.05.024Open
protocatechuate 4,5-dioxygenase (LigAB)variant F103TSphingobium sp. strain SYK-6gallate22.70.21107pH 7.5, 25 °Cdoi:10.1016/j.procbio.2015.05.024Open
protocatechuate 4,5-dioxygenase (LigAB)variant F103TSphingobium sp. strain SYK-6protocatechuic acid1120.21544pH 7.5, 25 °Cdoi:10.1016/j.procbio.2015.05.024Open
protocatechuate 4,5-dioxygenase (LigAB)variant F103VSphingobium sp. strain SYK-63-O-methyl gallate49148.9pH 7.5, 25 °Cdoi:10.1016/j.procbio.2015.05.024Open
protocatechuate 4,5-dioxygenase (LigAB)variant F103VSphingobium sp. strain SYK-6gallate240.927.8pH 7.5, 25 °Cdoi:10.1016/j.procbio.2015.05.024Open
protocatechuate 4,5-dioxygenase (LigAB)variant F103VSphingobium sp. strain SYK-6protocatechuic acid890.26341pH 7.5, 25 °Cdoi:10.1016/j.procbio.2015.05.024Open