EC 5.1.1.3: glutamate racemase
IsomerasesOpen in Browse
CatLog read 42 records for EC 5.1.1.3 from 6 papers, for 7 organisms. Names in these papers: glutamate racemase (MurI), cystathionine β-lyase TmCBL, glutamate racemase (FnGR), glutamate racemase isozyme RacE2 and 4 more.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units.
CatLog also holds 85 records for EC 5.1.1.3 that are not yet re-read: from its earlier version, built from the enzyme databases and partly checked against the papers. All records for EC 5.1.1.3 in Browse.
Papers
| Paper | Organisms | Records |
|---|---|---|
| Kinetic characterization and quaternary structure of glutamate racemase from the periodontal anaerobe Fusobacterium nucleatum | Bacillus subtilis, Fusobacterium nucleatum | 9 |
| Primordial-like enzymes from bacteria with reduced genomes | Thermotoga maritima, Wolbachia endosymbiont of Drosophila melanogaster | 9 |
| Active site residues of glutamate racemase | Lactobacillus fermenti | 8 |
| Structural and functional analysis of two glutamate racemase isozymes from Bacillus anthracis and implications for inhibitor design | Bacillus anthracis | 8 |
| Structure and mechanism of glutamate racemase from Aquifex pyrophilus | Aquifex pyrophilus | 6 |
| Glutamate Racemase Is the Primary Target of β-Chloro-d-Alanine in Mycobacterium tuberculosis | Bacillus subtilis | 2 |
Records
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Paper | Open record |
|---|---|---|---|---|---|---|---|---|
| cystathionine β-lyase TmCBL | Thermotoga maritima | D-glutamate | 0.024 | 0.26 | 0.092 | pH 8, 37 °C | PMID 28640457 | Open record: cystathionine β-lyase TmCBL, D-glutamate |
| cystathionine β-lyase TmCBL | Thermotoga maritima | D-glutamate | 1 | 1.4 | 0.69 | pH 8, 70 °C | PMID 28640457 | Open record: cystathionine β-lyase TmCBL, D-glutamate |
| cystathionine β-lyase TmCBL | Thermotoga maritima | L-alanine | 0.022 | 4.2 | 0.0052 | pH 8.8, 37 °C | PMID 28640457 | Open record: cystathionine β-lyase TmCBL, L-alanine |
| cystathionine β-lyase TmCBL | Thermotoga maritima | L-alanine | 0.0065 | 8.2 | 7.9 × 10⁻⁴ | pH 8, 37 °C | PMID 28640457 | Open record: cystathionine β-lyase TmCBL, L-alanine |
| cystathionine β-lyase TmCBL | Thermotoga maritima | L-alanine | 0.0024 | 0.38 | 0.0063 | pH 8, 70 °C | PMID 28640457 | Open record: cystathionine β-lyase TmCBL, L-alanine |
| cystathionine β-lyase TmCBL | Thermotoga maritima | L-cystathionine | 2.3 | 0.4 | 5.8 | pH 8.8, 37 °C | PMID 28640457 | Open record: cystathionine β-lyase TmCBL, L-cystathionine |
| cystathionine β-lyase TmCBL | Thermotoga maritima | L-cystathionine | 3.3 | 0.7 | 4.7 | pH 8, 37 °C | PMID 28640457 | Open record: cystathionine β-lyase TmCBL, L-cystathionine |
| cystathionine β-lyase TmCBL | Thermotoga maritima | L-cystathionine | 9.2 | 1.3 | 7.3 | pH 8, 70 °C | PMID 28640457 | Open record: cystathionine β-lyase TmCBL, L-cystathionine |
| cystathionine β-lyase wMelCBL | Wolbachia endosymbiont of Drosophila melanogaster | D-glutamate | 0.017 | 0.8 | 0.021 | pH 8.8, 37 °C | PMID 28640457 | Open record: cystathionine β-lyase wMelCBL, D-glutamate |
| glutamate racemase (BsGR) | Bacillus subtilis | D-glutamate | 8.3 | 1.7 | 5 | pH 8, 37 °C | PMID 19772853 | Open record: glutamate racemase (BsGR), D-glutamate |
| glutamate racemase (BsGR) | Bacillus subtilis | L-glutamate | 63 | 14 | 4.6 | pH 8, 37 °C | PMID 19772853 | Open record: glutamate racemase (BsGR), L-glutamate |
| glutamate racemase (BsGR)variant V149A | Bacillus subtilis | D-glutamate | 15 | 10 | 1.5 | pH 8, 37 °C | PMID 19772853 | Open record: glutamate racemase (BsGR) variant V149A, D-glutamate |
| glutamate racemase (BsGR)variant V149A | Bacillus subtilis | L-glutamate | 76 | 47 | 1.8 | pH 8, 37 °C | PMID 19772853 | Open record: glutamate racemase (BsGR) variant V149A, L-glutamate |
| glutamate racemase (FnGR) | Fusobacterium nucleatum | D-glutamate | 26 | 1.7 | 15 | pH 8, 30 °C | PMID 19772853 | Open record: glutamate racemase (FnGR), D-glutamate |
| glutamate racemase (FnGR) | Fusobacterium nucleatum | D-glutamateHis6-tag removed by thrombin cleavage (pET15b construct) | 22 | 1.5 | 14 | pH 8, 30 °C | PMID 19772853 | Open record: glutamate racemase (FnGR), D-glutamate |
| glutamate racemase (FnGR) | Fusobacterium nucleatum | L-2-aminoadipic acid | 2.4 | 26 | 0.09 | pH 8, 30 °C | PMID 19772853 | Open record: glutamate racemase (FnGR), L-2-aminoadipic acid |
| glutamate racemase (FnGR) | Fusobacterium nucleatum | L-glutamate | 17.4 | 1.04 | 17 | pH 8, 30 °C | PMID 19772853 | Open record: glutamate racemase (FnGR), L-glutamate |
| glutamate racemase (FnGR) | Fusobacterium nucleatum | L-glutamateHis6-tag removed by thrombin cleavage (pET15b construct) | 13.8 | 0.9 | 15 | pH 8, 30 °C | PMID 19772853 | Open record: glutamate racemase (FnGR), L-glutamate |
| glutamate racemase (MurI) | Aquifex pyrophilus | D-glutamate | 0.056 | 0.55 | 0.1 | pH 8.5 | PMID 10331867 | Open record: glutamate racemase (MurI), D-glutamate |
| glutamate racemase (MurI) | Aquifex pyrophilus | L-glutamate | 0.21 | 3.3 | 0.075 | pH 8.5 | PMID 10331867 | Open record: glutamate racemase (MurI), L-glutamate |
| glutamate racemase (MurI)variant D7S | Aquifex pyrophilus | D-glutamate | 3.4 × 10⁻⁴ | 0.35 | 0.0012 | pH 8.5 | PMID 10331867 | Open record: glutamate racemase (MurI) variant D7S, D-glutamate |
| glutamate racemase (MurI)variant D7S | Aquifex pyrophilus | L-glutamate | 0.037 | 11 | 0.0042 | pH 8.5 | PMID 10331867 | Open record: glutamate racemase (MurI) variant D7S, L-glutamate |
| glutamate racemase (MurI)variant E147N | Aquifex pyrophilus | D-glutamate | 0.0047 | 3 | 1.7 × 10⁻⁵ | pH 8.5 | PMID 10331867 | Open record: glutamate racemase (MurI) variant E147N, D-glutamate |
| glutamate racemase (MurI)variant E147N | Aquifex pyrophilus | L-glutamate | 0.0023 | 3.2 | 7.9 × 10⁻⁴ | pH 8.5 | PMID 10331867 | Open record: glutamate racemase (MurI) variant E147N, L-glutamate |
| glutamate racemase (MurI)variant D10N | Lactobacillus fermenti | D-glutamic acid | 0.063 | 1.2 | 0.053 | pH 8, 30 °C | PMID 11371180 | Open record: glutamate racemase (MurI) variant D10N, D-glutamic acid |
| glutamate racemase (MurI)variant D10N | Lactobacillus fermenti | L-glutamic acid | 0.068 | 1.3 | 0.053 | pH 8, 30 °C | PMID 11371180 | Open record: glutamate racemase (MurI) variant D10N, L-glutamic acid |
| glutamate racemase (MurI)variant D36N | Lactobacillus fermenti | D-glutamic acid | 22 | 41 | 0.55 | pH 8, 30 °C | PMID 11371180 | Open record: glutamate racemase (MurI) variant D36N, D-glutamic acid |
| glutamate racemase (MurI)variant D36N | Lactobacillus fermenti | L-glutamic acid | 20 | 35 | 0.57 | pH 8, 30 °C | PMID 11371180 | Open record: glutamate racemase (MurI) variant D36N, L-glutamic acid |
| glutamate racemase (MurI)variant E152Q | Lactobacillus fermenti | D-glutamic acid | 22 | 3.5 | 6.1 | pH 8, 30 °C | PMID 11371180 | Open record: glutamate racemase (MurI) variant E152Q, D-glutamic acid |
| glutamate racemase (MurI)variant E152Q | Lactobacillus fermenti | L-glutamic acid | 38 | 5.8 | 6.5 | pH 8, 30 °C | PMID 11371180 | Open record: glutamate racemase (MurI) variant E152Q, L-glutamic acid |
| glutamate racemase (MurI)variant H186N | Lactobacillus fermenti | D-glutamic acid | 0.093 | 4.5 | 0.021 | pH 8, 30 °C | PMID 11371180 | Open record: glutamate racemase (MurI) variant H186N, D-glutamic acid |
| glutamate racemase (MurI)variant H186N | Lactobacillus fermenti | L-glutamic acid | 0.045 | 1.1 | 0.041 | pH 8, 30 °C | PMID 11371180 | Open record: glutamate racemase (MurI) variant H186N, L-glutamic acid |
| glutamate racemase isozyme RacE1 | Bacillus anthracis | D-glutamate | 3.9 | 0.9 | 4.3 | pH 8.2, 25 °C | PMID 17610893 | Open record: glutamate racemase isozyme RacE1, D-glutamate |
| glutamate racemase isozyme RacE1 | Bacillus anthracis | D-glutamate | 2.8 | 1.9 | 1.5 | pH 9.2, 25 °C | PMID 17610893 | Open record: glutamate racemase isozyme RacE1, D-glutamate |
| glutamate racemase isozyme RacE1 | Bacillus anthracis | L-glutamate | 17.7 | 8 | 2.2 | pH 8.2, 25 °C | PMID 17610893 | Open record: glutamate racemase isozyme RacE1, L-glutamate |
| glutamate racemase isozyme RacE2 | Bacillus anthracis | D-glutamate | 1.6 | 0.2 | 8 | pH 8.2, 25 °C | PMID 17610893 | Open record: glutamate racemase isozyme RacE2, D-glutamate |
| glutamate racemase isozyme RacE2 | Bacillus anthracis | D-glutamate | 1.3 | 0.2 | 6.5 | pH 9.2, 25 °C | PMID 17610893 | Open record: glutamate racemase isozyme RacE2, D-glutamate |
| glutamate racemase isozyme RacE2 | Bacillus anthracis | L-glutamate | 38 | 3.7 | 10.3 | pH 8.2, 25 °C | PMID 17610893 | Open record: glutamate racemase isozyme RacE2, L-glutamate |
| glutamate racemase isozyme RacE2variant V149A | Bacillus anthracis | D-glutamate | 4.9 | 0.2 | 24 calc. | pH 8.2, 25 °C | PMID 17610893 | Open record: glutamate racemase isozyme RacE2 variant V149A, D-glutamate |
| glutamate racemase isozyme RacE2variant V149A | Bacillus anthracis | L-glutamate | 67 | 4.6 | 15 calc. | pH 8.2, 25 °C | PMID 17610893 | Open record: glutamate racemase isozyme RacE2 variant V149A, L-glutamate |
| glutamate racemase MurI (BsMurI) | Bacillus subtilis | D-glutamate | 12.6 | 1.5 | 6.1 | 37 °C | PMID 27480853 | Open record: glutamate racemase MurI (BsMurI), D-glutamate |
| glutamate racemase MurI (BsMurI) | Bacillus subtilis | L-glutamate | 226.4 | 37 | 8.4 | 37 °C | PMID 27480853 | Open record: glutamate racemase MurI (BsMurI), L-glutamate |