CatLogenzyme kinetics catalog

EC 5.3.1.6: ribose-5-phosphate isomerase

IsomerasesOpen in Browse

CatLog read 58 records for EC 5.3.1.6 from 8 papers, for 9 organisms. Names in these papers: ribose-5-phosphate isomerase, D-ribose-5-phosphate isomerase (RpiB), D-ribose-5-phosphate isomerase (PRIPh), ribose-5-phosphate isomerase B (RpiB) and 5 more.

Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units.

CatLog also holds 84 records for EC 5.3.1.6 that are not yet re-read: from its earlier version, built from the enzyme databases and partly checked against the papers. All records for EC 5.3.1.6 in Browse.

Papers

PaperOrganismsRecords
Novel substrates of a ribose-5-phosphate isomerase from Clostridium thermocellumClostridium thermocellum12
A hyperthermostable D-ribose-5-phosphate isomerase from Pyrococcus horikoshii characterization and three-dimensional structurePyrococcus horikoshii8
Substrate specificity of ribose-5-phosphate isomerases from Clostridium difficile and Thermotoga maritimaClostridium difficile, Thermotoga maritima8
D-ribose-5-phosphate isomerase from spinach: heterologous overexpression, purification, characterization, and site-directed mutagenesis of the recombinant enzymeEscherichia coli, Spinacia oleracea7
Increased D-allose production by the R132E mutant of ribose-5-phosphate isomerase from Clostridium thermocellumClostridium thermocellum7
Ribose 5-phosphate isomerase type B from Trypanosoma cruzi: kinetic properties and site-directed mutagenesis reveal information about the reaction mechanismTrypanosoma cruzi6
D-ribose-5-phosphate isomerase B from Escherichia coli is also a functional D-allose-6-phosphate isomerase, while the Mycobacterium tuberculosis enzyme is notEscherichia coli, Mycobacterium tuberculosis5
Mutational and Structural Analysis of Conserved Residues in Ribose-5-Phosphate Isomerase B from Leishmania donovani: Role in Substrate Recognition and Conformational StabilityLeishmania donovani5

Records

EnzymeOrganismSubstratekcat (s⁻¹)Km (mM)kcat/Km (mM⁻¹ s⁻¹)ConditionsPaper
D-ribose-5-phosphate isomerase (PRIPh)Pyrococcus horikoshiiD-ribose 5-phosphate320——pH 6, 50 °CPMID 12057201Open
D-ribose-5-phosphate isomerase (PRIPh)Pyrococcus horikoshiiD-ribose 5-phosphate6.25 × 10³——pH 6, 93 °CPMID 12057201Open
D-ribose-5-phosphate isomerase (PRIPh)Pyrococcus horikoshiiD-ribose 5-phosphate3201.17270 calc.PMID 12057201Open
D-ribose-5-phosphate isomerase (PRIPh)Pyrococcus horikoshiiD-ribulose 5-phosphate50——50 °CPMID 12057201Open
D-ribose-5-phosphate isomerase (PRIPh)variant D168NPyrococcus horikoshiiD-ribose 5-phosphate3122.39131 calc.PMID 12057201Open
D-ribose-5-phosphate isomerase (PRIPh)variant D85NPyrococcus horikoshiiD-ribose 5-phosphate8.30.7112 calc.PMID 12057201Open
D-ribose-5-phosphate isomerase (PRIPh)variant K125APyrococcus horikoshiiD-ribose 5-phosphate1515.130 calc.PMID 12057201Open
D-ribose-5-phosphate isomerase (PRIPh)variant R100APyrococcus horikoshiiD-ribose 5-phosphate1777.1324.8 calc.PMID 12057201Open
D-ribose-5-phosphate isomerase (RpiB)Clostridium thermocellumD-Allose268210625pH 7.5, 65 °CPMID 18984017Open
D-ribose-5-phosphate isomerase (RpiB)Clostridium thermocellumD-Psicose23475344pH 7.5, 65 °CPMID 18984017Open
D-ribose-5-phosphate isomerase (RpiB)Clostridium thermocellumD-Ribose11,87844269pH 7.5, 65 °CPMID 18984017Open
D-ribose-5-phosphate isomerase (RpiB)Clostridium thermocellumD-ribose 5-phosphate51,998173029pH 7.5, 65 °CPMID 18984017Open
D-ribose-5-phosphate isomerase (RpiB)Clostridium thermocellumD-Ribulose919334269pH 7.5, 65 °CPMID 18984017Open
D-ribose-5-phosphate isomerase (RpiB)Clostridium thermocellumD-ribulose 5-phosphate39,528152589pH 7.5, 65 °CPMID 18984017Open
D-ribose-5-phosphate isomerase (RpiB)Clostridium thermocellumD-Talose1192320.5pH 7.5, 65 °CPMID 18984017Open
D-ribose-5-phosphate isomerase (RpiB)Clostridium thermocellumL-Allose15069815pH 7.5, 65 °CPMID 18984017Open
D-ribose-5-phosphate isomerase (RpiB)Clostridium thermocellumL-Ribose3221731.9pH 7.5, 65 °CPMID 18984017Open
D-ribose-5-phosphate isomerase (RpiB)Clostridium thermocellumL-Ribulose173190.05pH 7.5, 65 °CPMID 18984017Open
D-ribose-5-phosphate isomerase (RpiB)Clostridium thermocellumL-Tagatose182212515pH 7.5, 65 °CPMID 18984017Open
D-ribose-5-phosphate isomerase (RpiB)Clostridium thermocellumL-Talose13,42337368pH 7.5, 65 °CPMID 18984017Open
D-ribose-5-phosphate isomerase B (EcRpiB)Escherichia coliD-allose 6-phosphate6.10.512pH 7.5, 37 °CPMID 18640127Open
D-ribose-5-phosphate isomerase B (EcRpiB)Escherichia coliD-ribose 5-phosphate521.147PMID 18640127Open
D-ribose-5-phosphate isomerase B (EcRpiB)variant H99NEscherichia coliD-ribose 5-phosphate20.82.5PMID 18640127Open
D-ribose-5-phosphate isomerase B (MtRpiB)Mycobacterium tuberculosisD-allose 6-phosphate0.22160.014pH 7.5, 37 °CPMID 18640127Open
D-ribose-5-phosphate isomerase B (MtRpiB)Mycobacterium tuberculosisD-ribose 5-phosphate47150PMID 18640127Open
ribose 5-phosphate isomerase type B (TcRpiB)Trypanosoma cruziribose 5-phosphate1243.0 calc.pH 7.6PMID 16981853Open
ribose 5-phosphate isomerase type B (TcRpiB)Trypanosoma cruziribulose 5-phosphate4.71.43.4 calc.pH 8.4, 25 °CPMID 16981853Open
ribose 5-phosphate isomerase type B (TcRpiB)variant H102ATrypanosoma cruziribose 5-phosphate120.50 calc.pH 7.6PMID 16981853Open
ribose 5-phosphate isomerase type B (TcRpiB)variant H102ATrypanosoma cruziribulose 5-phosphate10.72.54.3 calc.pH 8.4, 25 °CPMID 16981853Open
ribose 5-phosphate isomerase type B (TcRpiB)variant H11ATrypanosoma cruziribose 5-phosphate97234.2 calc.pH 7.6PMID 16981853Open
ribose 5-phosphate isomerase type B (TcRpiB)variant H138ATrypanosoma cruziribose 5-phosphate10101.0 calc.pH 7.6PMID 16981853Open
ribose-5-phosphate isomeraseClostridium thermocellumD-psicose23475344pH 7.5, 80 °CPMID 21132286Open
ribose-5-phosphate isomerasevariant R132AClostridium thermocellumD-psicose2.58 × 10³5646pH 7.5, 80 °CPMID 21132286Open
ribose-5-phosphate isomerasevariant R132DClostridium thermocellumD-psicose26744658pH 7.5, 80 °CPMID 21132286Open
ribose-5-phosphate isomerasevariant R132EClostridium thermocellumD-psicose27434364pH 7.5, 80 °CPMID 21132286Open
ribose-5-phosphate isomerasevariant R132IClostridium thermocellumD-psicose22117828pH 7.5, 80 °CPMID 21132286Open
ribose-5-phosphate isomerasevariant R132KClostridium thermocellumD-psicose19625337pH 7.5, 80 °CPMID 21132286Open
ribose-5-phosphate isomerasevariant R132QClostridium thermocellumD-psicose23355443pH 7.5, 80 °CPMID 21132286Open
ribose-5-phosphate isomeraseSpinacia oleraceaD-ribose 5-phosphate3.44 × 10³0.635.46 × 10³pH 8, 25 °CPMID 10620366Open
ribose-5-phosphate isomeraseSpinacia oleraceaD-ribulose 5-phosphate—0.2—pH 8, 25 °CPMID 10620366Open
ribose-5-phosphate isomerasevariant D87ASpinacia oleraceaD-ribose 5-phosphate0.04210.560.0758pH 8, 25 °CPMID 10620366Open
ribose-5-phosphate isomerasevariant D90ASpinacia oleraceaD-ribose 5-phosphate13.20.5225.2pH 8, 25 °CPMID 10620366Open
ribose-5-phosphate isomerasevariant E91ASpinacia oleraceaD-ribose 5-phosphate9461.17810pH 8, 25 °CPMID 10620366Open
ribose-5-phosphate isomerasevariant K100ASpinacia oleraceaD-ribose 5-phosphate2.544.410.575pH 8, 25 °CPMID 10620366Open
ribose-5-phosphate isomerase (E. coli host RPI, partially purified)Escherichia coliD-ribose 5-phosphate—0.89—pH 8, 25 °CPMID 10620366Open
ribose-5-phosphate isomerase B (LdRpiB)Leishmania donovaniD-ribose 5-phosphate292.5111.18pH 7.5PMID 26953696Open
ribose-5-phosphate isomerase B (LdRpiB)variant H11NLeishmania donovaniD-ribose 5-phosphate323.49.512pH 7.5PMID 26953696Open
ribose-5-phosphate isomerase B (LdRpiB)variant H138NLeishmania donovaniD-ribose 5-phosphate118.141.355pH 7.5PMID 26953696Open
ribose-5-phosphate isomerase B (LdRpiB)variant P47ALeishmania donovaniD-ribose 5-phosphate184.34.241pH 7.5PMID 26953696Open
ribose-5-phosphate isomerase B (LdRpiB)variant Y46FLeishmania donovaniD-ribose 5-phosphate252.599.820pH 7.5PMID 26953696Open
ribose-5-phosphate isomerase B (RpiB)Clostridium difficileD-Allose2004600.4pH 7.5, 40 °CPMID 20155483Open
ribose-5-phosphate isomerase B (RpiB)Clostridium difficileD-Ribose1602700.6pH 7.5, 40 °CPMID 20155483Open
ribose-5-phosphate isomerase B (RpiB)Clostridium difficileD-Ribose 5-phosphate1.51 × 10⁴30500pH 7.5, 40 °CPMID 20155483Open
ribose-5-phosphate isomerase B (RpiB)Clostridium difficileL-Talose1405200.3pH 7.5, 40 °CPMID 20155483Open
ribose-5-phosphate isomerase B (RpiB)Thermotoga maritimaD-Allose1401301.1pH 8, 70 °CPMID 20155483Open
ribose-5-phosphate isomerase B (RpiB)Thermotoga maritimaD-Ribose5001104.7pH 8, 70 °CPMID 20155483Open
ribose-5-phosphate isomerase B (RpiB)Thermotoga maritimaD-Ribose 5-phosphate2 × 10⁴37540pH 8, 70 °CPMID 20155483Open
ribose-5-phosphate isomerase B (RpiB)Thermotoga maritimaL-Talose1.34 × 10³1907pH 8, 70 °CPMID 20155483Open