Values CatLog read from this paper
Catalytic mechanism of Escherichia coli endonuclease VIII: roles of the intercalation loop and the zinc finger
PMID 17002303doi:10.1021/bi060663eOpen in Browse
The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.
CatLog read 75 records (143 values) from this paper: endonuclease VIII (Nei) from Escherichia coli.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks.
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), adenine (A) opposite the lesion | 5.8 × 10⁻⁴ | 1.6 × 10⁻⁴ | 3.7 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), adenine (A) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), cytosine (C) opposite the lesion | 0.0082 | 6.6 × 10⁻⁶ | 1.23 × 10³ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), guanine (G) opposite the lesion | 0.072 | 8.5 × 10⁻⁶ | 8.5 × 10³ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), guanine (G) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), thymine (T) opposite the lesion | 0.0032 | 3.5 × 10⁻⁶ | 900 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), thymine (T) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), adenine (A) opposite the lesion | 0.0078 | 6.1 × 10⁻⁴ | 13 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), adenine (A) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), cytosine (C) opposite the lesion | 0.0158 | 6.8 × 10⁻⁴ | 23 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), guanine (G) opposite the lesion | 0.0132 | 5.8 × 10⁻⁴ | 23 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), guanine (G) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), thymine (T) opposite the lesion | 0.023 | 0.0013 | 18 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), thymine (T) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = abasic (AP) site made from uracil by uracil-DNA glycosylase, adenine (A) opposite the lesion | 0.0107 | 8.3 × 10⁻⁸ | 1.28 × 10⁵ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = abasic (AP) site made from uracil by uracil-DNA glycosylase, adenine (A) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = abasic (AP) site made from uracil by uracil-DNA glycosylase, guanine (G) opposite the lesion | 0.0088 | 1.1 × 10⁻⁷ | 8 × 10⁴ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = abasic (AP) site made from uracil by uracil-DNA glycosylase, guanine (G) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), adenine (A) opposite the lesion | 0.035 | 3.2 × 10⁻⁶ | 1.1 × 10⁴ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), adenine (A) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), cytosine (C) opposite the lesion | 0.042 | 4.4 × 10⁻⁶ | 9.5 × 10³ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), guanine (G) opposite the lesion | 0.033 | 2.3 × 10⁻⁶ | 1.45 × 10⁴ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), guanine (G) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), thymine (T) opposite the lesion | 0.048 | 4.4 × 10⁻⁶ | 1.1 × 10⁴ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), thymine (T) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), adenine (A) opposite the lesion | 0.023 | 1.6 × 10⁻⁵ | 1.47 × 10³ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), adenine (A) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), cytosine (C) opposite the lesion | 0.0115 | 4.7 × 10⁻⁶ | 2.5 × 10³ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), guanine (G) opposite the lesion | 0.057 | 2.3 × 10⁻⁶ | 2.5 × 10⁴ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), guanine (G) opposite the lesion |
| endonuclease VIII (Nei) | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), thymine (T) opposite the lesion | 0.0112 | 4.6 × 10⁻⁶ | 2.5 × 10³ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei), 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), thymine (T) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), adenine (A) opposite the lesion | 2.3 × 10⁻⁴ | 2.6 × 10⁻⁴ | 0.9 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), adenine (A) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), cytosine (C) opposite the lesion | 1.3 × 10⁻⁴ | 2.7 × 10⁻⁴ | 0.5 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), guanine (G) opposite the lesion | 1.5 × 10⁻⁴ | 7.7 × 10⁻⁵ | 2 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), thymine (T) opposite the lesion | 6.7 × 10⁻⁵ | 0.0014 | 0.048 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), thymine (T) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), adenine (A) opposite the lesion | — | — | 3.3 × 10⁻⁴ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), adenine (A) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), cytosine (C) opposite the lesion | — | — | 7.2 × 10⁻⁴ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), guanine (G) opposite the lesion | — | — | 6.3 × 10⁻⁴ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), thymine (T) opposite the lesion | — | — | 2.3 × 10⁻⁴ | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), thymine (T) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), adenine (A) opposite the lesion | — | — | 3 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), adenine (A) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), cytosine (C) opposite the lesion | — | — | 2.8 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), guanine (G) opposite the lesion | 0.0058 | 2.4 × 10⁻⁴ | 25 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), thymine (T) opposite the lesion | — | — | 2.8 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), thymine (T) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), adenine (A) opposite the lesion | — | — | 3 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), adenine (A) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), cytosine (C) opposite the lesion | — | — | 3.2 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), guanine (G) opposite the lesion | 0.0057 | 2.1 × 10⁻⁴ | 27 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant Q261A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), thymine (T) opposite the lesion | — | — | 3.3 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q261A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), thymine (T) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), adenine (A) opposite the lesion | 7.2 × 10⁻⁵ | 3.8 × 10⁻⁵ | 1.8 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), adenine (A) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), cytosine (C) opposite the lesion | 0.0133 | 1.4 × 10⁻⁴ | 95 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), guanine (G) opposite the lesion | 6.5 × 10⁻⁵ | 4.2 × 10⁻⁵ | 1.55 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), thymine (T) opposite the lesion | 0.0117 | 1.6 × 10⁻⁴ | 73 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), thymine (T) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), adenine (A) opposite the lesion | — | — | 0.077 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), adenine (A) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), cytosine (C) opposite the lesion | — | — | 0.11 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), guanine (G) opposite the lesion | — | — | 0.097 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), thymine (T) opposite the lesion | — | — | 0.092 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), thymine (T) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = abasic (AP) site made from uracil by uracil-DNA glycosylase, adenine (A) opposite the lesion | 0.0015 | 2.8 × 10⁻⁵ | 53 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = abasic (AP) site made from uracil by uracil-DNA glycosylase, adenine (A) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = abasic (AP) site made from uracil by uracil-DNA glycosylase, guanine (G) opposite the lesion | 0.0018 | 2.2 × 10⁻⁵ | 83 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = abasic (AP) site made from uracil by uracil-DNA glycosylase, guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), adenine (A) opposite the lesion | — | — | 78 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), adenine (A) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), cytosine (C) opposite the lesion | — | — | 92 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), guanine (G) opposite the lesion | 0.016 | 4.9 × 10⁻⁵ | 330 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), thymine (T) opposite the lesion | 0.022 | 1.9 × 10⁻⁴ | 113 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), thymine (T) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), adenine (A) opposite the lesion | — | — | 98 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), adenine (A) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), cytosine (C) opposite the lesion | — | — | 93 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), guanine (G) opposite the lesion | — | — | 90 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant Q69A/L70A/Y71A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), thymine (T) opposite the lesion | — | — | 90 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant Q69A/L70A/Y71A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), thymine (T) opposite the lesion |
| endonuclease VIII (Nei)variant R171A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), adenine (A) opposite the lesion | — | — | 0.062 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant R171A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), adenine (A) opposite the lesion |
| endonuclease VIII (Nei)variant R171A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), cytosine (C) opposite the lesion | — | — | 0.018 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant R171A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei)variant R171A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), guanine (G) opposite the lesion | — | — | 0.028 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant R171A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant R171A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), thymine (T) opposite the lesion | — | — | 0.048 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant R171A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 8-oxo-7,8-dihydroguanine (8-oxoG), thymine (T) opposite the lesion |
| endonuclease VIII (Nei)variant R171A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = abasic (AP) site made from uracil by uracil-DNA glycosylase, adenine (A) opposite the lesion | — | — | 0.017 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant R171A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = abasic (AP) site made from uracil by uracil-DNA glycosylase, adenine (A) opposite the lesion |
| endonuclease VIII (Nei)variant R171A | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = abasic (AP) site made from uracil by uracil-DNA glycosylase, guanine (G) opposite the lesion | — | — | 0.01 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant R171A, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = abasic (AP) site made from uracil by uracil-DNA glycosylase, guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant R171A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), adenine (A) opposite the lesion | — | — | 0.085 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant R171A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), adenine (A) opposite the lesion |
| endonuclease VIII (Nei)variant R171A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), cytosine (C) opposite the lesion | — | — | 0.047 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant R171A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei)variant R171A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), guanine (G) opposite the lesion | — | — | 0.073 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant R171A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant R171A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), thymine (T) opposite the lesion | — | — | 0.088 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant R171A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), thymine (T) opposite the lesion |
| endonuclease VIII (Nei)variant R171A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), adenine (A) opposite the lesion | — | — | 0.043 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant R171A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), adenine (A) opposite the lesion |
| endonuclease VIII (Nei)variant R171A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), cytosine (C) opposite the lesion | — | — | 0.028 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant R171A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei)variant R171A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), guanine (G) opposite the lesion | — | — | 0.035 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant R171A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant R171A | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), thymine (T) opposite the lesion | — | — | 0.05 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant R171A, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), thymine (T) opposite the lesion |
| endonuclease VIII (Nei)variant ΔQLY69-71 | Escherichia coli | 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), guanine (G) opposite the lesion | 4.8 × 10⁻⁵ | 5.4 × 10⁻⁵ | 0.9 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant ΔQLY69-71, 23-mer DNA duplex 5'-CTCTCCCTTCXCTCCTTTCCTCT-3' with X = 5,6-dihydrouracil (DHU), guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant ΔQLY69-71 | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), adenine (A) opposite the lesion | 0.0025 | 6.6 × 10⁻⁵ | 38 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant ΔQLY69-71, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), adenine (A) opposite the lesion |
| endonuclease VIII (Nei)variant ΔQLY69-71 | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), cytosine (C) opposite the lesion | — | — | 48 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant ΔQLY69-71, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei)variant ΔQLY69-71 | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), guanine (G) opposite the lesion | — | — | 52 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant ΔQLY69-71, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant ΔQLY69-71 | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), thymine (T) opposite the lesion | — | — | 47 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant ΔQLY69-71, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5R,6S)-thymine glycol (TgC), thymine (T) opposite the lesion |
| endonuclease VIII (Nei)variant ΔQLY69-71 | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), adenine (A) opposite the lesion | — | — | 62 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant ΔQLY69-71, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), adenine (A) opposite the lesion |
| endonuclease VIII (Nei)variant ΔQLY69-71 | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), cytosine (C) opposite the lesion | — | — | 62 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant ΔQLY69-71, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), cytosine (C) opposite the lesion |
| endonuclease VIII (Nei)variant ΔQLY69-71 | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), guanine (G) opposite the lesion | — | — | 62 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant ΔQLY69-71, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), guanine (G) opposite the lesion |
| endonuclease VIII (Nei)variant ΔQLY69-71 | Escherichia coli | 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), thymine (T) opposite the lesion | — | — | 62 | pH 7.5, 25 °C | Open record: endonuclease VIII (Nei) variant ΔQLY69-71, 23-mer DNA duplex 5'-GACAAGCGCAGYCAGCCGAACAC-3' with Y = cis-(5S,6R)-thymine glycol (TgA), thymine (T) opposite the lesion |