Values CatLog read from this paper
Insights into the substrate specificity of plant peptide deformylase, an essential enzyme with potential for the development of novel biotechnology applications in agriculture
PMID 18412546doi:10.1042/bj20071641Open in Browse
The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.
CatLog read 6 records (16 values) from this paper: peptide deformylase 1B (AtPDF1B) from Arabidopsis thaliana.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks. CatLog calculated the 2 kcat/Km values marked “calc.” from kcat and Km; no printed kcat/Km was read for those records.
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| peptide deformylase 1B (AtPDF1B) | Arabidopsis thaliana | N-formyl-Met-Leu-p-nitroanilideAtPDF1Bt: trypsin-proteolysed AtPDF1B; N-terminus at Lys65 | 1.7 | 0.118 | 14 calc. | Open record: peptide deformylase 1B (AtPDF1B), N-formyl-Met-Leu-p-nitroanilide | |
| peptide deformylase 1B (AtPDF1B) | Arabidopsis thaliana | N-formyl-Met-Leu-p-nitroanilideAtPDF1Bet: engineered truncated AtPDF1B | 22.6 | 0.078 | 290 calc. | Open record: peptide deformylase 1B (AtPDF1B), N-formyl-Met-Leu-p-nitroanilide | |
| peptide deformylase 1B (AtPDF1B) | Arabidopsis thaliana | N-formyl-Met-Thr-Ala | 88.5 | 9.2 | 9.6 | Open record: peptide deformylase 1B (AtPDF1B), N-formyl-Met-Thr-Ala | |
| peptide deformylase 1B (AtPDF1B)variant Y178A | Arabidopsis thaliana | N-formyl-Met-Thr-Ala | 111.2 | 14.4 | 7.7 | Open record: peptide deformylase 1B (AtPDF1B) variant Y178A, N-formyl-Met-Thr-Ala | |
| peptide deformylase 1B (AtPDF1B)variant Y178F | Arabidopsis thaliana | N-formyl-Met-Thr-Ala | 112.2 | 7.5 | 15 | Open record: peptide deformylase 1B (AtPDF1B) variant Y178F, N-formyl-Met-Thr-Ala | |
| peptide deformylase 1B (AtPDF1B)variant Y178R | Arabidopsis thaliana | N-formyl-Met-Thr-Ala | 109.9 | 4.9 | 22.6 | Open record: peptide deformylase 1B (AtPDF1B) variant Y178R, N-formyl-Met-Thr-Ala |