EC 3.5.1.88: peptide deformylase

HydrolasesOpen in Browse

CatLog read 158 records for EC 3.5.1.88 from 7 papers, for 6 organisms. Names in these papers: peptide deformylase, peptide deformylase (HsPDF), human mitochondrial peptide deformylase (HsPDF), peptide deformylase 1A (AtPDF1A) and 7 more.

Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units.

CatLog also holds 50 records for EC 3.5.1.88 that are not yet re-read: from its earlier version, built from the enzyme databases and partly checked against the papers. All records for EC 3.5.1.88 in Browse.

Papers

Papers with records for EC 3.5.1.88
Paper	Organisms	Records
Substrate recognition and selectivity of peptide deformylase. Similarities and differences with metzincins and thermolysin	Escherichia coli	69
Distinctive features of the two classes of eukaryotic peptide deformylases	Arabidopsis thaliana, Lycopersicon esculentum	30
An unusual peptide deformylase features in the human mitochondrial N-terminal methionine excision pathway	Arabidopsis thaliana, Homo sapiens	26
Structure and activity of human mitochondrial peptide deformylase, a novel cancer target	Homo sapiens	18
Insights into the substrate specificity of plant peptide deformylase, an essential enzyme with potential for the development of novel biotechnology applications in agriculture	Arabidopsis thaliana	6
Kinetic control of nascent protein biogenesis by peptide deformylase	—	5
Identification of crucial amino acids of bacterial Peptide deformylases affecting enzymatic activity in response to oxidative stress	Mycobacterium tuberculosis, Salmonella enterica serovar Typhimurium	4

Records

Records for EC 3.5.1.88 read from the paper
Enzyme	Organism	Substrate	k_cat (s⁻¹)	K_m (mM)	k_cat/K_m (mM⁻¹ s⁻¹)	Conditions	Paper	Open record
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Ala-His-Ala	0.0831	8.14	0.0102	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Ala-His-Ala
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Arg-His-Gln	0.0202	2.97	0.0068	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Arg-His-Gln
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Asn-Phe-Ala	0.0502	2.443	0.02055	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Asn-Phe-Ala
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Asn-Pro-Leu	0.0211	12.44	0.001697	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Asn-Pro-Leu
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Glu-His-Gln	0.00937	42.9	2.18 × 10⁻⁴	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Glu-His-Gln
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Gly-His-Gln	0.0155	5.14	0.00757	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Gly-His-Gln
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Leu-Arg	—	34.4	—	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Leu-Arg
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Leu-His-Gln	0.00275	0.521	0.00445	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Leu-His-Gln
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Leu-Lys-Leu	0.0049	5.76	8.506 × 10⁻⁴	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Leu-Lys-Leu
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Met-Tyr-Ala	0.0646	4.085	0.0158	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Met-Tyr-Ala
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Phe-Ala-Asp	0.057	1.351	0.04216	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Phe-Ala-Asp
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Phe-His-Gln	0.0134	3.01	0.00445	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Phe-His-Gln
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Pro-Gln-Leu	0.0283	24.09	0.001174	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Pro-Gln-Leu
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Thr-His-Glnapparent kcat; apparent Km	0.044	2.287	0.01924	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Thr-His-Gln
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Thr-His-Gln	0.0277	1.56	0.0164	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Thr-His-Gln
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Thr-Met-His	0.0362	2.135	0.01698	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Thr-Met-His
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Thr-Pro-Met	0.0174	1.181	0.01477	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Thr-Pro-Met
human mitochondrial peptide deformylase (HsPDF)	Homo sapiens	formyl-Met-Val-His-Gln	0.00581	0.738	0.00401	pH 7.5	PMID 19236878	Open record: human mitochondrial peptide deformylase (HsPDF), formyl-Met-Val-His-Gln
peptide deformylase	Escherichia coli	Fo-Ala-Yaa-NH2 sub-library (P1' = Ala)	—	—	0.84	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Ala-Yaa-NH2 sub-library (P1' = Ala)
peptide deformylase	Escherichia coli	Fo-Arg-Yaa-NH2 sub-library (P1' = Arg)	—	—	0.015	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Arg-Yaa-NH2 sub-library (P1' = Arg)
peptide deformylase	Escherichia coli	Fo-Asn-Yaa-NH2 sub-library (P1' = Asn)	—	—	0.011	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Asn-Yaa-NH2 sub-library (P1' = Asn)
peptide deformylase	Escherichia coli	Fo-Asp-Yaa-NH2 sub-library (P1' = Asp)	—	—	9 × 10⁻⁴	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Asp-Yaa-NH2 sub-library (P1' = Asp)
peptide deformylase	Escherichia coli	Fo-Cys(Bzl)-Yaa-NH2 sub-library (P1' = CysBzl)	—	—	6.4	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Cys(Bzl)-Yaa-NH2 sub-library (P1' = CysBzl)
peptide deformylase	Escherichia coli	Fo-Cys(OMeBzl)-Yaa-NH2 sub-library (P1' = Cys(OMeBzl))	—	—	6.5	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Cys(OMeBzl)-Yaa-NH2 sub-library (P1' = Cys(OMeBzl))
peptide deformylase	Escherichia coli	Fo-Gln-Yaa-NH2 sub-library (P1' = Gln)	—	—	1.8	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Gln-Yaa-NH2 sub-library (P1' = Gln)
peptide deformylase	Escherichia coli	Fo-Glu-Yaa-NH2 sub-library (P1' = Glu)	—	—	0.018	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Glu-Yaa-NH2 sub-library (P1' = Glu)
peptide deformylase	Escherichia coli	Fo-Gly-Yaa-NH2 sub-library (P1' = Gly)	—	—	0.017	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Gly-Yaa-NH2 sub-library (P1' = Gly)
peptide deformylase	Escherichia coli	Fo-His-Yaa-NH2 sub-library (P1' = His)	—	—	0.07	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-His-Yaa-NH2 sub-library (P1' = His)
peptide deformylase	Escherichia coli	Fo-homo-Phe-Yaa-NH2 sub-library (P1' = h Phe)	—	—	3.3	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-homo-Phe-Yaa-NH2 sub-library (P1' = h Phe)
peptide deformylase	Escherichia coli	Fo-Ile-Yaa-NH2 sub-library (P1' = Ile)	—	—	1.8	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Ile-Yaa-NH2 sub-library (P1' = Ile)
peptide deformylase	Escherichia coli	Fo-Leu-Yaa-NH2 sub-library (P1' = Leu)	—	—	3	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Leu-Yaa-NH2 sub-library (P1' = Leu)
peptide deformylase	Escherichia coli	Fo-Lys-Yaa-NH2 sub-library (P1' = Lys)	—	—	0.05	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Lys-Yaa-NH2 sub-library (P1' = Lys)
peptide deformylase	Escherichia coli	Fo-Met-Yaa-NH2 sub-library (P1' = Met)	270	2.1	131	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Met-Yaa-NH2 sub-library (P1' = Met)
peptide deformylase	Escherichia coli	Fo-n-hexyl side chain-Yaa-NH2 sub-library (P1' = n Hex)	130	2.3	57	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-n-hexyl side chain-Yaa-NH2 sub-library (P1' = n Hex)
peptide deformylase	Escherichia coli	Fo-n-pentyl side chain-Yaa-NH2 sub-library (P1' = n Pent)	230	3.2	72	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-n-pentyl side chain-Yaa-NH2 sub-library (P1' = n Pent)
peptide deformylase	Escherichia coli	Fo-Nle (n-butyl)-Yaa-NH2 sub-library (P1' = Nle (n But))	220	1.1	166	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Nle (n-butyl)-Yaa-NH2 sub-library (P1' = Nle (n But))
peptide deformylase	Escherichia coli	Fo-p-Phe-Yaa-NH2 sub-library (P1' = p Phe)	—	—	10	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-p-Phe-Yaa-NH2 sub-library (P1' = p Phe)
peptide deformylase	Escherichia coli	Fo-Phe-Yaa-NH2 sub-library (P1' = Phe)	100	2.7	37	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Phe-Yaa-NH2 sub-library (P1' = Phe)
peptide deformylase	Escherichia coli	Fo-Ser(Bzl)-Yaa-NH2 sub-library (P1' = Ser(Bzl))	—	—	14	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Ser(Bzl)-Yaa-NH2 sub-library (P1' = Ser(Bzl))
peptide deformylase	Escherichia coli	Fo-Ser-Yaa-NH2 sub-library (P1' = Ser)	—	—	0.04	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Ser-Yaa-NH2 sub-library (P1' = Ser)
peptide deformylase	Escherichia coli	Fo-Thr-Yaa-NH2 sub-library (P1' = Thr)	—	—	0.034	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Thr-Yaa-NH2 sub-library (P1' = Thr)
peptide deformylase	Escherichia coli	Fo-Tyr-Yaa-NH2 sub-library (P1' = Tyr)	—	—	2.4	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Tyr-Yaa-NH2 sub-library (P1' = Tyr)
peptide deformylase	Escherichia coli	Fo-Val-Yaa-NH2 sub-library (P1' = Val)	—	—	0.19	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, Fo-Val-Yaa-NH2 sub-library (P1' = Val)
peptide deformylase	Escherichia coli	N-formyl-norleucyl-alaninamide	270	1.3	210	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-alaninamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-alpha-aspartamide	120	4.3	29	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-alpha-aspartamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-alpha-glutamamide	200	4.3	46	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-alpha-glutamamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-argininamide	300	0.66	450	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-argininamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-asparaginamide	320	8.2	32	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-asparaginamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-glutaminamide	280	1.5	200	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-glutaminamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-glycinamide	260	5.5	47	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-glycinamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-histidinamide	250	1.8	140	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-histidinamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-leucinamide	150	1.8	81	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-leucinamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-lysinamide	230	0.62	360	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-lysinamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-methioninamide	190	1.7	110	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-methioninamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-norleucinamide	210	2.9	72	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-norleucinamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-phenylalaninamide	200	3	65	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-phenylalaninamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-prolinamide	150	3.7	41	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-prolinamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-serinamide	170	1	170	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-serinamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-threoninamide	180	1.6	110	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-threoninamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-tryptophanamide	130	1.9	69	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-tryptophanamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-tyrosinamide	140	3.3	42	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-tyrosinamide
peptide deformylase	Escherichia coli	N-formyl-norleucyl-valinamide	160	1.9	85	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase, N-formyl-norleucyl-valinamide
peptide deformylasevariant A47S	Escherichia coli	N-formyl-methionyl-alanine	53	5.9	9	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant A47S, N-formyl-methionyl-alanine
peptide deformylasevariant C129A	Escherichia coli	N-formyl-methionyl-alanine	200	8.2	24	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant C129A, N-formyl-methionyl-alanine
peptide deformylasevariant C129W	Escherichia coli	N-formyl-methionyl-alanine	—	—	0.015	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant C129W, N-formyl-methionyl-alanine
peptide deformylasevariant E133Q	Escherichia coli	N-formyl-methionyl-alanine	5.1	0.011	0.0022	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant E133Q, N-formyl-methionyl-alanine
peptide deformylasevariant E88A	Escherichia coli	N-formyl-methionyl-alanine	0.83	6.7	0.12	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant E88A, N-formyl-methionyl-alanine
peptide deformylasevariant G45A	Escherichia coli	N-formyl-methionyl-alanine	129	13.8	9.3	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant G45A, N-formyl-methionyl-alanine
peptide deformylasevariant G89P	Escherichia coli	N-formyl-methionyl-alanine	—	—	0.012	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant G89P, N-formyl-methionyl-alanine
peptide deformylasevariant G89S	Escherichia coli	N-formyl-methionyl-alanine	11.4	13	0.9	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant G89S, N-formyl-methionyl-alanine
peptide deformylasevariant I128A	Escherichia coli	N-formyl-methionyl-alanine	—	—	3.9	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant I128A, N-formyl-methionyl-alanine
peptide deformylasevariant I128F	Escherichia coli	N-formyl-methionyl-alanine	0.3	2.3	0.1	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant I128F, N-formyl-methionyl-alanine
peptide deformylasevariant I128R	Escherichia coli	N-formyl-methionyl-alanine	1.5	40	0.4	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant I128R, N-formyl-methionyl-alanine
peptide deformylasevariant I128S	Escherichia coli	N-formyl-methionyl-alanine	25.8	7.8	3.2	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant I128S, N-formyl-methionyl-alanine
peptide deformylasevariant I130F	Escherichia coli	N-formyl-methionyl-alanine	135	4.8	28	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant I130F, N-formyl-methionyl-alanine
peptide deformylasevariant I44F	Escherichia coli	N-formyl-methionyl-alanine	9	2.1	4.4	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant I44F, N-formyl-methionyl-alanine
peptide deformylasevariant I86A	Escherichia coli	N-formyl-methionyl-alanine	20.7	9	2.3	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant I86A, N-formyl-methionyl-alanine
peptide deformylasevariant I86F	Escherichia coli	N-formyl-methionyl-alanine	7.7	4	1.9	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant I86F, N-formyl-methionyl-alanine
peptide deformylasevariant L125A	Escherichia coli	N-formyl-methionyl-alanine	6.7	18.7	0.36	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant L125A, N-formyl-methionyl-alanine
peptide deformylasevariant L125W	Escherichia coli	N-formyl-methionyl-alanine	2.1	11.6	0.18	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant L125W, N-formyl-methionyl-alanine
peptide deformylasevariant L126F	Escherichia coli	N-formyl-methionyl-alanine	264	9.1	29	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant L126F, N-formyl-methionyl-alanine
peptide deformylasevariant L91A	Escherichia coli	N-formyl-methionyl-alanine	—	—	0.3	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant L91A, N-formyl-methionyl-alanine
peptide deformylasevariant Q50A	Escherichia coli	N-formyl-methionyl-alanine	0.061	8	0.008	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant Q50A, N-formyl-methionyl-alanine
peptide deformylasevariant Q50E	Escherichia coli	N-formyl-methionyl-alanine	0.033	2.3	0.014	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant Q50E, N-formyl-methionyl-alanine
peptide deformylasevariant Q50K	Escherichia coli	N-formyl-methionyl-alanine	0.0019	6.7	2.8 × 10⁻⁴	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant Q50K, N-formyl-methionyl-alanine
peptide deformylasevariant Q50M	Escherichia coli	N-formyl-methionyl-alanine	0.28	10.1	0.028	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant Q50M, N-formyl-methionyl-alanine
peptide deformylasevariant Q50N	Escherichia coli	N-formyl-methionyl-alanine	0.022	6.5	0.0035	pH 7.5, 37 °C	PMID 10373378	Open record: peptide deformylase variant Q50N, N-formyl-methionyl-alanine
peptide deformylase (HsPDF)variant C43G	Homo sapiens	N-formyl-Met-Ala-Ser	—	—	0.014	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant C43G, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant C43G/E91L	Homo sapiens	N-formyl-Met-Ala-Ser	2.1	0.9	2.3	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant C43G/E91L, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant C43G/S47A/E91L	Homo sapiens	N-formyl-Met-Ala-Serwithout preserving agent	18	2.9	6.2	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant C43G/S47A/E91L, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant C43G/S47A/E91L	Homo sapiens	N-formyl-Met-Ala-Serin the presence of TCEP and catalase	—	—	2.5	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant C43G/S47A/E91L, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant E91A	Homo sapiens	N-formyl-Met-Ala-Ser	0.2	1.1	0.1	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant E91A, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant E91L	Homo sapiens	N-formyl-Met-Ala-Ser	0.07	2.6	0.026	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant E91L, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant E91M	Homo sapiens	N-formyl-Met-Ala-Ser	0.04	0.6	0.069	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant E91M, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant FL	Homo sapiens	N-formyl-Met-Ala-Ser	—	—	0.027	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant FL, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant S47A	Homo sapiens	N-formyl-Met-Ala-Ser	0.4	4.1	0.1	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant S47A, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant S47A/E91L	Homo sapiens	N-formyl-Met-Ala-Ser	0.17	1.2	0.138	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant S47A/E91L, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant W125L	Homo sapiens	N-formyl-Met-Ala-Ser	0.015	1	0.016	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant W125L, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant ΔN19	Homo sapiens	N-formyl-Met-Ala-Ser	0.1	2.4	0.042	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant ΔN19, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant ΔN39	Homo sapiens	N-formyl-Met-Ala-Serwithout preserving agent	0.06	1.5	0.038	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant ΔN39, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant ΔN39	Homo sapiens	N-formyl-Met-Ala-Serin the presence of TCEP and catalase	1	3.9	0.25	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant ΔN39, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant ΔN39/R-10Q/R-11Q	Homo sapiens	N-formyl-Met-Ala-Ser	—	—	0.564	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant ΔN39/R-10Q/R-11Q, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant ΔN39/R-13Q	Homo sapiens	N-formyl-Met-Ala-Ser	—	—	0.193	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant ΔN39/R-13Q, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant ΔN45	Homo sapiens	N-formyl-Met-Ala-Serwithout preserving agent	0.057	1.5	0.038	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant ΔN45, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant ΔN45	Homo sapiens	N-formyl-Met-Ala-Serin the presence of TCEP and catalase	—	—	0.084	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant ΔN45, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant ΔN62	Homo sapiens	N-formyl-Met-Ala-Serin the presence of TCEP and catalase	0.11	1.5	0.073	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant ΔN62, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant ΔN62	Homo sapiens	N-formyl-Met-Ala-Serin the presence of NiCl2	0.26	3.6	0.072	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant ΔN62, N-formyl-Met-Ala-Ser
peptide deformylase (HsPDF)variant ΔN62	Homo sapiens	N-formyl-Met-Ala-Serwithout preserving agent	0.03	1.6	0.018	37 °C	PMID 14532271	Open record: peptide deformylase (HsPDF) variant ΔN62, N-formyl-Met-Ala-Ser
peptide deformylase (mPDF)	Mycobacterium tuberculosis	N-formyl-methionyl-alanine	8.8	2.9	3	pH 7, 30 °C	PMID 24142250	Open record: peptide deformylase (mPDF), N-formyl-methionyl-alanine
peptide deformylase (mPDF)variant M145C	Mycobacterium tuberculosis	N-formyl-methionyl-alanine	3.1	4.7	0.7	pH 7, 30 °C	PMID 24142250	Open record: peptide deformylase (mPDF) variant M145C, N-formyl-methionyl-alanine
peptide deformylase (PDF)	—	formyl-methionyl-leucyl-p-nitroaniline	16	0.024	700	pH 7.5, 37 °C	PMID 34961771	Open record: peptide deformylase (PDF), formyl-methionyl-leucyl-p-nitroaniline
peptide deformylase (PDF)	—	ribosome-nascent-chain complex carrying a 75-amino-acid DnaK nascent chain with N-terminal formylmethionine	0.05	5 × 10⁻⁴	100	pH 7.5, 37 °C	PMID 34961771	Open record: peptide deformylase (PDF), ribosome-nascent-chain complex carrying a 75-amino-acid DnaK nascent chain with N-terminal formylmethionine
peptide deformylase (PDF)	—	ribosome-nascent-chain complex carrying a 75-amino-acid proOmpA nascent chain with N-terminal formylmethionine	0.26	3 × 10⁻⁴	900	pH 7.5, 37 °C	PMID 34961771	Open record: peptide deformylase (PDF), ribosome-nascent-chain complex carrying a 75-amino-acid proOmpA nascent chain with N-terminal formylmethionine
peptide deformylase (PDF)	—	ribosome-nascent-chain complex carrying a 75-amino-acid RNaseH nascent chain with N-terminal formylmethionine	0.24	6 × 10⁻⁴	400	pH 7.5, 37 °C	PMID 34961771	Open record: peptide deformylase (PDF), ribosome-nascent-chain complex carrying a 75-amino-acid RNaseH nascent chain with N-terminal formylmethionine
peptide deformylase (PDF)	—	ribosome-nascent-chain complex carrying a 75-amino-acid TolB nascent chain with N-terminal formylmethionine	0.04	2.5 × 10⁻⁴	200	pH 7.5, 37 °C	PMID 34961771	Open record: peptide deformylase (PDF), ribosome-nascent-chain complex carrying a 75-amino-acid TolB nascent chain with N-terminal formylmethionine
peptide deformylase (sPDF)	Salmonella enterica serovar Typhimurium	N-formyl-methionyl-alanine	4.1	8	0.5	pH 7, 30 °C	PMID 24142250	Open record: peptide deformylase (sPDF), N-formyl-methionyl-alanine
peptide deformylase (sPDF)variant C130M/V63C	Salmonella enterica serovar Typhimurium	N-formyl-methionyl-alanine	0.8	7.7	0.1	pH 7, 30 °C	PMID 24142250	Open record: peptide deformylase (sPDF) variant C130M/V63C, N-formyl-methionyl-alanine
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-methionyl-L-alanine	33	0.7	47 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-methionyl-L-alanine
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-methionyl-L-alanine methyl ester	29	1.5	19 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-methionyl-L-alanine methyl ester
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-methionyl-L-alanyl-L-serine	22	0.25	88	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-methionyl-L-alanyl-L-serine
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-methionyl-L-leucine 4-nitroanilide	0.21	0.19	1.1 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-methionyl-L-leucine 4-nitroanilide
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-methionyl-L-leucyl-L-glutamic acid	1.1	8	0.14 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-methionyl-L-leucyl-L-glutamic acid
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-methionyl-L-leucyl-L-phenylalanine	0.7	0.23	3.0 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-methionyl-L-leucyl-L-phenylalanine
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-methionyl-L-seryl-L-asparaginyl-L-glutamic acid	11	4.1	2.7 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-methionyl-L-seryl-L-asparaginyl-L-glutamic acid
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-norleucinamide	0.9	13	0.069 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-norleucinamide
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-norleucine N-methylamide	0.6	4.3	0.14 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-norleucine N-methylamide
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-norleucyl-L-alanyl-L-serine	26	0.6	43 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-norleucyl-L-alanyl-L-serine
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-norleucyl-L-argininamide	5	0.42	12 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-norleucyl-L-argininamide
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-norleucyl-L-aspartic acid alpha-amide	0.4	0.74	0.54 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-norleucyl-L-aspartic acid alpha-amide
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-norleucyl-L-leucinamide	0.36	0.79	0.46 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-norleucyl-L-leucinamide
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-norleucyl-L-serinamide	10	0.42	24 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-norleucyl-L-serinamide
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-norleucylglycinamide	1.4	2.9	0.48 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-norleucylglycinamide
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-norvalyl-L-alanyl-L-serine	18	9.4	1.9 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-norvalyl-L-alanyl-L-serine
peptide deformylase 1A (AtPDF1A)	Arabidopsis thaliana	N-formyl-L-phenylalanyl-L-alanyl-L-serine	0.6	3	0.20 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (AtPDF1A), N-formyl-L-phenylalanyl-L-alanyl-L-serine
peptide deformylase 1A (LePDF1A)	Lycopersicon esculentum	N-formyl-L-methionyl-L-alanyl-L-serine	15	0.27	54	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1A (LePDF1A), N-formyl-L-methionyl-L-alanyl-L-serine
peptide deformylase 1B (AtPDF1B)	Arabidopsis thaliana	N-formyl-L-methionyl-L-alanine	15	4.3	3.5 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1B (AtPDF1B), N-formyl-L-methionyl-L-alanine
peptide deformylase 1B (AtPDF1B)	Arabidopsis thaliana	N-formyl-L-methionyl-L-alanine methyl ester	259	6.9	38 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1B (AtPDF1B), N-formyl-L-methionyl-L-alanine methyl ester
peptide deformylase 1B (AtPDF1B)	Arabidopsis thaliana	N-formyl-L-methionyl-L-alanyl-L-serineTCEP (Fe form)	13	8.2	1.6	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1B (AtPDF1B), N-formyl-L-methionyl-L-alanyl-L-serine
peptide deformylase 1B (AtPDF1B)	Arabidopsis thaliana	N-formyl-L-methionyl-L-alanyl-L-serine5 mM NiCl2 (Ni form)	75	5.6	13.3	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1B (AtPDF1B), N-formyl-L-methionyl-L-alanyl-L-serine
peptide deformylase 1B (AtPDF1B)	Arabidopsis thaliana	N-formyl-L-methionyl-L-leucyl-L-glutamic acid	9.2	12	0.77 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1B (AtPDF1B), N-formyl-L-methionyl-L-leucyl-L-glutamic acid
peptide deformylase 1B (AtPDF1B)	Arabidopsis thaliana	N-formyl-L-methionyl-L-seryl-L-asparaginyl-L-glutamic acid	1.9	2	0.95 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1B (AtPDF1B), N-formyl-L-methionyl-L-seryl-L-asparaginyl-L-glutamic acid
peptide deformylase 1B (AtPDF1B)	Arabidopsis thaliana	N-formyl-L-norleucyl-L-alanyl-L-serine	136	11	12 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1B (AtPDF1B), N-formyl-L-norleucyl-L-alanyl-L-serine
peptide deformylase 1B (AtPDF1B)	Arabidopsis thaliana	N-formyl-L-norleucyl-L-argininamide	138	0.5	280 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1B (AtPDF1B), N-formyl-L-norleucyl-L-argininamide
peptide deformylase 1B (AtPDF1B)	Arabidopsis thaliana	N-formyl-L-norleucyl-L-aspartic acid alpha-amide	6.4	1	6.4 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1B (AtPDF1B), N-formyl-L-norleucyl-L-aspartic acid alpha-amide
peptide deformylase 1B (AtPDF1B)	Arabidopsis thaliana	N-formyl-L-norleucyl-L-serinamide	51	1	51 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1B (AtPDF1B), N-formyl-L-norleucyl-L-serinamide
peptide deformylase 1B (AtPDF1B)	Arabidopsis thaliana	N-formyl-L-norleucylglycinamide	13	4.3	3.0 calc.	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1B (AtPDF1B), N-formyl-L-norleucylglycinamide
peptide deformylase 1B (AtPDF1B)	Arabidopsis thaliana	N-formyl-Met-Leu-p-nitroanilideAtPDF1Bt: trypsin-proteolysed AtPDF1B; N-terminus at Lys65	1.7	0.118	14 calc.		PMID 18412546	Open record: peptide deformylase 1B (AtPDF1B), N-formyl-Met-Leu-p-nitroanilide
peptide deformylase 1B (AtPDF1B)	Arabidopsis thaliana	N-formyl-Met-Leu-p-nitroanilideAtPDF1Bet: engineered truncated AtPDF1B	22.6	0.078	290 calc.		PMID 18412546	Open record: peptide deformylase 1B (AtPDF1B), N-formyl-Met-Leu-p-nitroanilide
peptide deformylase 1B (AtPDF1B)	Arabidopsis thaliana	N-formyl-Met-Thr-Ala	88.5	9.2	9.6		PMID 18412546	Open record: peptide deformylase 1B (AtPDF1B), N-formyl-Met-Thr-Ala
peptide deformylase 1B (AtPDF1B)variant Y178A	Arabidopsis thaliana	N-formyl-Met-Thr-Ala	111.2	14.4	7.7		PMID 18412546	Open record: peptide deformylase 1B (AtPDF1B) variant Y178A, N-formyl-Met-Thr-Ala
peptide deformylase 1B (AtPDF1B)variant Y178F	Arabidopsis thaliana	N-formyl-Met-Thr-Ala	112.2	7.5	15		PMID 18412546	Open record: peptide deformylase 1B (AtPDF1B) variant Y178F, N-formyl-Met-Thr-Ala
peptide deformylase 1B (AtPDF1B)variant Y178R	Arabidopsis thaliana	N-formyl-Met-Thr-Ala	109.9	4.9	22.6		PMID 18412546	Open record: peptide deformylase 1B (AtPDF1B) variant Y178R, N-formyl-Met-Thr-Ala
peptide deformylase 1B (LePDF1B)	Lycopersicon esculentum	N-formyl-L-methionyl-L-alanyl-L-serine	—	—	0.9	pH 7.5, 37 °C	PMID 11733990	Open record: peptide deformylase 1B (LePDF1B), N-formyl-L-methionyl-L-alanyl-L-serine
peptide deformylase PDF1A (AtPDF1A)variant G43C	Arabidopsis thaliana	N-formyl-Met-Ala-Serenzyme purified in the presence of NiCl2	0.2	0.1	2	37 °C	PMID 14532271	Open record: peptide deformylase PDF1A (AtPDF1A) variant G43C, N-formyl-Met-Ala-Ser
peptide deformylase PDF1A (AtPDF1A)variant G43C	Arabidopsis thaliana	N-formyl-Met-Ala-Serenzyme purified without preserving agent	0.19	0.25	0.74	37 °C	PMID 14532271	Open record: peptide deformylase PDF1A (AtPDF1A) variant G43C, N-formyl-Met-Ala-Ser
peptide deformylase PDF1A (AtPDF1A)variant G43C/L91E	Arabidopsis thaliana	N-formyl-Met-Ala-Ser	0.11	0.7	0.47	37 °C	PMID 14532271	Open record: peptide deformylase PDF1A (AtPDF1A) variant G43C/L91E, N-formyl-Met-Ala-Ser
peptide deformylase PDF1A (AtPDF1A)variant L91E	Arabidopsis thaliana	N-formyl-Met-Ala-Ser	0.023	1.6	0.0145	37 °C	PMID 14532271	Open record: peptide deformylase PDF1A (AtPDF1A) variant L91E, N-formyl-Met-Ala-Ser
peptide deformylase PDF1A (AtPDF1A)variant W125L	Arabidopsis thaliana	N-formyl-Met-Ala-Ser	—	—	0.15	37 °C	PMID 14532271	Open record: peptide deformylase PDF1A (AtPDF1A) variant W125L, N-formyl-Met-Ala-Ser