Values CatLog read from this paper
Crystal structures of lysine-preferred racemases, the non-antibiotic selectable markers for transgenic plants
PMID 23118975doi:10.1371/journal.pone.0048301Open in Browse
The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.
CatLog read 9 records (18 values) from this paper: lysine racemase (Lyr), broad specificity amino acid racemase (Bar) from Proteus mirabilis, Pseudomonas putida.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks. CatLog calculated the 9 kcat/Km values marked “calc.” from kcat and Km; no printed kcat/Km was read for those records.
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| broad specificity amino acid racemase (Bar) | Pseudomonas putida | L-arginine | 37.13 | 14.5 | 2.56 calc. | pH 9, 50 °C | Open record: broad specificity amino acid racemase (Bar), L-arginine |
| broad specificity amino acid racemase (Bar) | Pseudomonas putida | L-lysine | 59.08 | 25.4 | 2.33 calc. | pH 9, 50 °C | Open record: broad specificity amino acid racemase (Bar), L-lysine |
| broad specificity amino acid racemase (Bar)variant A393Y | Pseudomonas putida | L-lysine | 24.27 | 33.9 | 0.716 calc. | pH 9, 50 °C | Open record: broad specificity amino acid racemase (Bar) variant A393Y, L-lysine |
| lysine racemase (Lyr) | Proteus mirabilis | L-arginine | 10.83 | 14.9 | 0.727 calc. | pH 9, 50 °C | Open record: lysine racemase (Lyr), L-arginine |
| lysine racemase (Lyr) | Proteus mirabilis | L-lysine | 55.43 | 21.8 | 2.54 calc. | pH 9, 50 °C | Open record: lysine racemase (Lyr), L-lysine |
| lysine racemase (Lyr)variant T391Y | Proteus mirabilis | L-arginine | 10.17 | 47.7 | 0.213 calc. | pH 9, 50 °C | Open record: lysine racemase (Lyr) variant T391Y, L-arginine |
| lysine racemase (Lyr)variant T391Y | Proteus mirabilis | L-lysine | 23.07 | 37.6 | 0.613 calc. | pH 9, 50 °C | Open record: lysine racemase (Lyr) variant T391Y, L-lysine |
| lysine racemase (Lyr)variant T391Y/S394Y | Proteus mirabilis | L-arginine | 0.38 | 75.5 | 0.0051 calc. | pH 9, 50 °C | Open record: lysine racemase (Lyr) variant T391Y/S394Y, L-arginine |
| lysine racemase (Lyr)variant T391Y/S394Y | Proteus mirabilis | L-lysine | 2.57 | 34.3 | 0.0748 calc. | pH 9, 50 °C | Open record: lysine racemase (Lyr) variant T391Y/S394Y, L-lysine |