Values CatLog read from this paper
Biochemical Characterization of Hypothetical Proteins from Helicobacter pylori
PMID 23825549doi:10.1371/journal.pone.0066605Open in Browse
The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.
CatLog read 18 records (54 values) from this paper: aminopeptidase (HP1037), peptidoglycan deacetylase / acetylxylan esterase (HP0310, PgdA), 3',5'-cyclic-nucleotide phosphodiesterase (HP1042) and 3 more from Helicobacter pylori.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks.
EC 3.1.1.72, EC 3.1.4.17, EC 3.5.4.4, EC 3.5.4.16
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| 3',5'-cyclic-nucleotide phosphodiesterase (HP1042) | Helicobacter pylori | adenosine 3',5'-cyclic monophosphate | 33.47 | 0.88 | 38 | pH 4.5, 30 °C | Open record: 3',5'-cyclic-nucleotide phosphodiesterase (HP1042), adenosine 3',5'-cyclic monophosphate |
| 3',5'-cyclic-nucleotide phosphodiesterase (HP1042) | Helicobacter pylori | bis(4-nitrophenyl) phosphate | 18.08 | 0.53 | 34.1 | pH 4.5, 30 °C | Open record: 3',5'-cyclic-nucleotide phosphodiesterase (HP1042), bis(4-nitrophenyl) phosphate |
| 3',5'-cyclic-nucleotide phosphodiesterase (HP1042) | Helicobacter pylori | guanosine 3',5'-cyclic monophosphate | 15.95 | 0.82 | 19.5 | pH 4.5, 30 °C | Open record: 3',5'-cyclic-nucleotide phosphodiesterase (HP1042), guanosine 3',5'-cyclic monophosphate |
| adenosine deaminase (HP0267) | Helicobacter pylori | adenine | 0.0078 | 2.04 | 0.004 | pH 7.5, 30 °C | Open record: adenosine deaminase (HP0267), adenine |
| adenosine deaminase (HP0267) | Helicobacter pylori | adenosine | 18.35 | 0.32 | 57.3 | pH 7.5, 30 °C | Open record: adenosine deaminase (HP0267), adenosine |
| adenosine deaminase (HP0267) | Helicobacter pylori | adenosine | 5.52 | 1.29 | 4.28 | pH 7.6, 25 °C | Open record: adenosine deaminase (HP0267), adenosine |
| aminopeptidase (HP1037) | Helicobacter pylori | N-succinyl-Ala-Ala-Ala-Pro-Phe-p-nitroanilide | 19.08 | 1.38 | 13.8 | pH 4.5, 30 °C | Open record: aminopeptidase (HP1037), N-succinyl-Ala-Ala-Ala-Pro-Phe-p-nitroanilide |
| aminopeptidase (HP1037) | Helicobacter pylori | Phe-Arg-7-amido-4-methylcoumarin | 0.17 | 7.43 | 0.02 | pH 4.5, 30 °C | Open record: aminopeptidase (HP1037), Phe-Arg-7-amido-4-methylcoumarin |
| aminopeptidase (HP1037) | Helicobacter pylori | pyroglutamyl-Pro-Arg-p-nitroanilide | 0.387 | 7.56 | 0.05 | pH 4.5, 30 °C | Open record: aminopeptidase (HP1037), pyroglutamyl-Pro-Arg-p-nitroanilide |
| aminopeptidase (HP1037) | Helicobacter pylori | succinyl-Ala-Ala-Ala-p-nitroanilide | 2.03 | 1.12 | 1.8 | pH 4.5, 30 °C | Open record: aminopeptidase (HP1037), succinyl-Ala-Ala-Ala-p-nitroanilide |
| aminopeptidase (HP1037) | Helicobacter pylori | succinyl-Leu-Leu-Val-Tyr-7-amido-4-methylcoumarin | 0.077 | 4.06 | 0.02 | pH 4.5, 30 °C | Open record: aminopeptidase (HP1037), succinyl-Leu-Leu-Val-Tyr-7-amido-4-methylcoumarin |
| ATPase/GTPase (HP1079) | Helicobacter pylori | adenosine 5'-triphosphate | 0.155 | 1.02 | 0.15 | pH 6, 30 °C | Open record: ATPase/GTPase (HP1079), adenosine 5'-triphosphate |
| ATPase/GTPase (HP1079) | Helicobacter pylori | guanosine 5'-triphosphate | 0.0095 | 0.58 | 0.02 | pH 6, 30 °C | Open record: ATPase/GTPase (HP1079), guanosine 5'-triphosphate |
| GTP cyclohydrolase I (HP0959) | Helicobacter pylori | guanosine 5'-triphosphate | 43.22 | 0.04 | 1.08 × 10³ | pH 4, 30 °C | Open record: GTP cyclohydrolase I (HP0959), guanosine 5'-triphosphate |
| peptidoglycan deacetylase / acetylxylan esterase (HP0310, PgdA) | Helicobacter pylori | 4-nitrophenyl acetate | 20.15 | 0.18 | 112 | pH 6, 30 °C | Open record: peptidoglycan deacetylase / acetylxylan esterase (HP0310, PgdA), 4-nitrophenyl acetate |
| peptidoglycan deacetylase / acetylxylan esterase (HP0310, PgdA) | Helicobacter pylori | acetylated chitin | 12.92 | 0.85 | 15.2 | pH 8, 30 °C | Open record: peptidoglycan deacetylase / acetylxylan esterase (HP0310, PgdA), acetylated chitin |
| peptidoglycan deacetylase / acetylxylan esterase (HP0310, PgdA) | Helicobacter pylori | acetylated chitosan | 16.13 | 0.85 | 18.9 | pH 8, 30 °C | Open record: peptidoglycan deacetylase / acetylxylan esterase (HP0310, PgdA), acetylated chitosan |
| peptidoglycan deacetylase / acetylxylan esterase (HP0310, PgdA) | Helicobacter pylori | acetylated xylan | 42.48 | 0.41 | 103 | pH 8, 30 °C | Open record: peptidoglycan deacetylase / acetylxylan esterase (HP0310, PgdA), acetylated xylan |