Values CatLog read from this paper
Trypanosome mRNA recapping is triggered by hypermethylation originating from cap 4
PMID 39011881doi:10.1093/nar/gkae614Open in Browse
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CatLog read 16 records (16 values) from this paper: TbCe1 (cytoplasmic capping enzyme, RNA kinase activity), TbCmt1 cap (guanine N7) methyltransferase from Trypanosoma brucei.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks.
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| TbCe1 (cytoplasmic capping enzyme, RNA kinase activity) | Trypanosoma brucei | 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with 2'-O-methyladenosine at A1 | 7.7 × 10⁻⁴ | — | — | pH 8.5, 27 °C | Open record: TbCe1 (cytoplasmic capping enzyme, RNA kinase activity), 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with 2'-O-methyladenosine at A1 |
| TbCe1 (cytoplasmic capping enzyme, RNA kinase activity) | Trypanosoma brucei | 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with 2'-O-ribose methylations on A1, A2, C3 and U4 | 9.5 × 10⁻⁴ | — | — | pH 8.5, 27 °C | Open record: TbCe1 (cytoplasmic capping enzyme, RNA kinase activity), 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with 2'-O-ribose methylations on A1, A2, C3 and U4 |
| TbCe1 (cytoplasmic capping enzyme, RNA kinase activity) | Trypanosoma brucei | 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with N1-methyladenosine at A1 | 1.2 × 10⁻⁴ | — | — | pH 8.5, 27 °C | Open record: TbCe1 (cytoplasmic capping enzyme, RNA kinase activity), 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with N1-methyladenosine at A1 |
| TbCe1 (cytoplasmic capping enzyme, RNA kinase activity) | Trypanosoma brucei | 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with N6,N6,2'-O-trimethyladenosine at A1 | 0.03072 | — | — | pH 8.5, 27 °C | Open record: TbCe1 (cytoplasmic capping enzyme, RNA kinase activity), 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with N6,N6,2'-O-trimethyladenosine at A1 |
| TbCe1 (cytoplasmic capping enzyme, RNA kinase activity) | Trypanosoma brucei | 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with N6,N6,2'-O-trimethyladenosine at A1 and 2'-O-ribose methylations on A2, C3 and U4 | 0.0264 | — | — | pH 8.5, 27 °C | Open record: TbCe1 (cytoplasmic capping enzyme, RNA kinase activity), 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with N6,N6,2'-O-trimethyladenosine at A1 and 2'-O-ribose methylations on A2, C3 and U4 |
| TbCe1 (cytoplasmic capping enzyme, RNA kinase activity) | Trypanosoma brucei | 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with N6,N6,2'-O-trimethyladenosine at A1, 2'-O-methyl A2 and C3, N3,2'-O-dimethyluridine at U4 (decapped cap 4) | 0.038 | — | — | pH 8.5, 27 °C | Open record: TbCe1 (cytoplasmic capping enzyme, RNA kinase activity), 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with N6,N6,2'-O-trimethyladenosine at A1, 2'-O-methyl A2 and C3, N3,2'-O-dimethyluridine at U4 (decapped cap 4) |
| TbCe1 (cytoplasmic capping enzyme, RNA kinase activity) | Trypanosoma brucei | 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with N6,N6-dimethyladenosine at A1 | 0.00353 | — | — | pH 8.5, 27 °C | Open record: TbCe1 (cytoplasmic capping enzyme, RNA kinase activity), 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with N6,N6-dimethyladenosine at A1 |
| TbCe1 (cytoplasmic capping enzyme, RNA kinase activity) | Trypanosoma brucei | 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with N6-methyladenosine at A1 | 0.00145 | — | — | pH 8.5, 27 °C | Open record: TbCe1 (cytoplasmic capping enzyme, RNA kinase activity), 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with N6-methyladenosine at A1 |
| TbCe1 (cytoplasmic capping enzyme, RNA kinase activity) | Trypanosoma brucei | 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with N6-methyladenosine at A1 and 2'-O-ribose methylations on C3 and U4 | 0.00127 | — | — | pH 8.5, 27 °C | Open record: TbCe1 (cytoplasmic capping enzyme, RNA kinase activity), 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA) with N6-methyladenosine at A1 and 2'-O-ribose methylations on C3 and U4 |
| TbCe1 (cytoplasmic capping enzyme, RNA kinase activity) | Trypanosoma brucei | 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA), unmodified | 2.2 × 10⁻⁴ | — | — | pH 8.5, 27 °C | Open record: TbCe1 (cytoplasmic capping enzyme, RNA kinase activity), 21-mer 5'-monophosphate RNA 5'-AACUAACGCUAUUAUUAGAAC-3' (first 21 nt of T. brucei SL RNA), unmodified |
| TbCe1 (cytoplasmic capping enzyme, RNA kinase activity) | Trypanosoma brucei | adenosine 5'-triphosphatep^{m6,2}A_mA_mC_m^{m3}U_m RNA | — | 2.1 × 10⁻⁴ | — | pH 8.5, 27 °C | Open record: TbCe1 (cytoplasmic capping enzyme, RNA kinase activity), adenosine 5'-triphosphate |
| TbCe1 (cytoplasmic capping enzyme, RNA kinase activity) | Trypanosoma brucei | adenosine 5'-triphosphatepA_mA_mC_mU_m RNA | — | 0.00209 | — | pH 8.5, 27 °C | Open record: TbCe1 (cytoplasmic capping enzyme, RNA kinase activity), adenosine 5'-triphosphate |
| TbCe1 (cytoplasmic capping enzyme, RNA kinase activity) | Trypanosoma brucei | adenosine 5'-triphosphatepA_m RNA | — | 0.00325 | — | pH 8.5, 27 °C | Open record: TbCe1 (cytoplasmic capping enzyme, RNA kinase activity), adenosine 5'-triphosphate |
| TbCe1 (cytoplasmic capping enzyme, RNA kinase activity) | Trypanosoma brucei | adenosine 5'-triphosphateunmodified pRNA | — | 0.00532 | — | pH 8.5, 27 °C | Open record: TbCe1 (cytoplasmic capping enzyme, RNA kinase activity), adenosine 5'-triphosphate |
| TbCmt1 cap (guanine N7) methyltransferase | Trypanosoma brucei | guanylated (GpppRNA-capped) 21-mer SL RNA with 2'-O-ribose methylations on A1, A2, C3 and U4 | 0.098 | — | — | pH 8, 27 °C | Open record: TbCmt1 cap (guanine N7) methyltransferase, guanylated (GpppRNA-capped) 21-mer SL RNA with 2'-O-ribose methylations on A1, A2, C3 and U4 |
| TbCmt1 cap (guanine N7) methyltransferase | Trypanosoma brucei | guanylated (GpppRNA-capped) 21-mer SL RNA without modification | 0.028 | — | — | pH 8, 27 °C | Open record: TbCmt1 cap (guanine N7) methyltransferase, guanylated (GpppRNA-capped) 21-mer SL RNA without modification |