Values CatLog read from this paper
A model of yeast glycolysis based on a consistent kinetic characterisation of all its enzymes
PMID 23831062doi:10.1016/j.febslet.2013.06.043Open in Browse
The paper itself is not on this site: read it at the publisher. This page lists only the values CatLog read from it.
CatLog read 29 records (47 values) from this paper: Eno1p (ENO, enolase), Cdc19p (PYK), Glk1p (HXK, glucokinase) and 15 more from Saccharomyces cerevisiae.
Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units. Values are in CatLog's units; each record opens in Browse with the line the paper prints and the checks. CatLog calculated the 18 kcat/Km values marked “calc.” from kcat and Km; no printed kcat/Km was read for those records.
EC 1.1.1.1, EC 1.1.1.54, EC 1.1.1.78, EC 1.2.1.12, EC 2.7.1.1, EC 2.7.1.2, EC 2.7.1.11, EC 2.7.1.40, EC 2.7.2.3, EC 4.1.1.1, EC 4.1.2.13, EC 4.2.1.11, EC 5.3.1.9, EC 5.4.2.1
| Enzyme | Organism | Substrate | kcat (s⁻¹) | Km (mM) | kcat/Km (mM⁻¹ s⁻¹) | Conditions | Open record |
|---|---|---|---|---|---|---|---|
| Adh1p (ADH) | Saccharomyces cerevisiae | acetaldehyde | 176 | 0.462 | 381 calc. | 30 °C | Open record: Adh1p (ADH), acetaldehyde |
| Cdc19p (PYK) | Saccharomyces cerevisiae | ADP | — | 0.243 | — | 30 °C | Open record: Cdc19p (PYK), ADP |
| Cdc19p (PYK) | Saccharomyces cerevisiae | phosphoenolpyruvate | 20.1 | 0.281 | 71.5 calc. | 30 °C | Open record: Cdc19p (PYK), phosphoenolpyruvate |
| Eno1p (ENO, enolase) | Saccharomyces cerevisiae | 2-phosphoglycerate | 7.6 | 0.043 | 180 calc. | 30 °C | Open record: Eno1p (ENO, enolase), 2-phosphoglycerate |
| Eno1p (ENO, enolase) | Saccharomyces cerevisiae | 2-phosphoglycerateenzyme stored at -70 °C after purification before assay | 0.8 | — | — | 30 °C | Open record: Eno1p (ENO, enolase), 2-phosphoglycerate |
| Eno1p (ENO, enolase) | Saccharomyces cerevisiae | 3-phosphoglycerate | 5.07 | 0.617 | 8.22 calc. | 30 °C | Open record: Eno1p (ENO, enolase), 3-phosphoglycerate |
| Eno2p (ENO, enolase 2) | Saccharomyces cerevisiae | 2-phosphoglycerate | 19.9 | 0.104 | 191 calc. | 30 °C | Open record: Eno2p (ENO, enolase 2), 2-phosphoglycerate |
| Fba1p (FBA, fructose bisphosphate aldolase) | Saccharomyces cerevisiae | fructose 1,6-bisphosphate | 4.14 | 0.451 | 9.18 calc. | 30 °C | Open record: Fba1p (FBA, fructose bisphosphate aldolase), fructose 1,6-bisphosphate |
| Glk1p (HXK, glucokinase) | Saccharomyces cerevisiae | ATP | — | 0.865 | — | 30 °C | Open record: Glk1p (HXK, glucokinase), ATP |
| Glk1p (HXK, glucokinase) | Saccharomyces cerevisiae | glucose | 0.0721 | 0.0106 | 6.80 calc. | 30 °C | Open record: Glk1p (HXK, glucokinase), glucose |
| Gpm1p (GPM, phosphoglycerate mutase) | Saccharomyces cerevisiae | 2-phosphoglycerate | 400 | 1.41 | 280 calc. | 30 °C | Open record: Gpm1p (GPM, phosphoglycerate mutase), 2-phosphoglycerate |
| Hxk1p (HXK, hexokinase) | Saccharomyces cerevisiae | ATP | — | 0.293 | — | 30 °C | Open record: Hxk1p (HXK, hexokinase), ATP |
| Hxk1p (HXK, hexokinase) | Saccharomyces cerevisiae | glucose | 10.2 | 0.15 | 68 calc. | 30 °C | Open record: Hxk1p (HXK, hexokinase), glucose |
| Hxk2p (HXK, hexokinase) | Saccharomyces cerevisiae | ATP | — | 0.195 | — | 30 °C | Open record: Hxk2p (HXK, hexokinase), ATP |
| Hxk2p (HXK, hexokinase) | Saccharomyces cerevisiae | glucose | 63.1 | 0.2 | 320 calc. | 30 °C | Open record: Hxk2p (HXK, hexokinase), glucose |
| Pdc1p (PDC, pyruvate decarboxylase) | Saccharomyces cerevisiae | pyruvate | 12.1 | 8.5 | 1.4 calc. | 30 °C | Open record: Pdc1p (PDC, pyruvate decarboxylase), pyruvate |
| Pdc1p (PDC, pyruvate decarboxylase) | Saccharomyces cerevisiae | pyruvateenzyme stored at -70 °C after purification before assay | 3 | — | — | 30 °C | Open record: Pdc1p (PDC, pyruvate decarboxylase), pyruvate |
| Pdc5p (PDC, pyruvate decarboxylase) | Saccharomyces cerevisiae | pyruvate | 10.3 | 7.08 | 1.45 calc. | 30 °C | Open record: Pdc5p (PDC, pyruvate decarboxylase), pyruvate |
| Pdc5p (PDC, pyruvate decarboxylase) | Saccharomyces cerevisiae | pyruvateenzyme stored at -70 °C after purification before assay | 2 | — | — | 30 °C | Open record: Pdc5p (PDC, pyruvate decarboxylase), pyruvate |
| Pdc6p (PDC, pyruvate decarboxylase) | Saccharomyces cerevisiae | pyruvate | 9.21 | 2.92 | 3.15 calc. | 30 °C | Open record: Pdc6p (PDC, pyruvate decarboxylase), pyruvate |
| Pfk1p:Pfk2p (PFK, phosphofructokinase) | Saccharomyces cerevisiae | fructose 6-phosphate | 210 | — | — | 30 °C | Open record: Pfk1p:Pfk2p (PFK, phosphofructokinase), fructose 6-phosphate |
| Pgi1p (PGI) | Saccharomyces cerevisiae | fructose 6-phosphate | — | 0.307 | — | 30 °C | Open record: Pgi1p (PGI), fructose 6-phosphate |
| Pgi1p (PGI) | Saccharomyces cerevisiae | glucose 6-phosphate | 487 | 1.03 | 473 calc. | 30 °C | Open record: Pgi1p (PGI), glucose 6-phosphate |
| Pgk1p (PGK) | Saccharomyces cerevisiae | 3-phosphoglycerate | 58.6 | 4.58 | 12.8 calc. | 30 °C | Open record: Pgk1p (PGK), 3-phosphoglycerate |
| Pgk1p (PGK) | Saccharomyces cerevisiae | ATP | — | 1.99 | — | 30 °C | Open record: Pgk1p (PGK), ATP |
| Tdh1p (TDH) | Saccharomyces cerevisiae | glyceraldehyde 3-phosphate | 19.1 | 0.495 | 38.6 calc. | 30 °C | Open record: Tdh1p (TDH), glyceraldehyde 3-phosphate |
| Tdh2p (TDH) | Saccharomyces cerevisiae | glyceraldehyde 3-phosphate | 8.63 | 0.77 | 11 calc. | 30 °C | Open record: Tdh2p (TDH), glyceraldehyde 3-phosphate |
| Tdh3p (TDH) | Saccharomyces cerevisiae | 1,3-bisphosphoglycerate | — | 0.909 | — | 30 °C | Open record: Tdh3p (TDH), 1,3-bisphosphoglycerate |
| Tdh3p (TDH) | Saccharomyces cerevisiae | glyceraldehyde 3-phosphate | 18.2 | 0.423 | 43.0 calc. | 30 °C | Open record: Tdh3p (TDH), glyceraldehyde 3-phosphate |