EC 4.2.1.2: fumarate hydratase

LyasesOpen in Browse

CatLog read 107 records for EC 4.2.1.2 from 9 papers, for 9 organisms. Names in these papers: LmFH-2, AtFUM2 (cytosolic fumarase), fumarase (RoFUM), fumarase (fumarate hydratase) and 11 more.

Read from the paper by an AI model and checked against the paper by a second, separate AI run; code converted the units.

CatLog also holds 131 records for EC 4.2.1.2 that are not yet re-read: from its earlier version, built from the enzyme databases and partly checked against the papers. All records for EC 4.2.1.2 in Browse.

Papers

Papers with records for EC 4.2.1.2
PaperOrganismsRecords
The complex allosteric and redox regulation of the fumarate hydratase and malate dehydratase reactions of Arabidopsis thaliana Fumarase 1 and 2 gives clues for understanding the massive accumulation…Arabidopsis thaliana23
Mesaconase/Fumarase FumD in Escherichia coli O157:H7 and Promiscuity of Escherichia coli Class I Fumarases FumA and FumBEscherichia coli, Escherichia coli O157:H718
Structural and Biochemical Investigations of the [4Fe-4S] Cluster-Containing Fumarate Hydratase from Leishmania majorLeishmania major16
Fumarate Production by Torulopsis glabrata: Engineering Heterologous Fumarase Expression and Improving Acid ToleranceRhizopus oryzae13
Purification and characterization of fumarase from Corynebacterium glutamicumCorynebacterium glutamicum12
The role of the allosteric B site in the fumarase reactionEscherichia coli10
Fumarate hydratase isoforms of Leishmania major: subcellular localization, structural and kinetic propertiesLeishmania major8
Fumarase From Cyanidioschyzon merolae Stably Shows High Catalytic Activity for Fumarate Hydration Under High Temperature ConditionsCyanidioschyzon merolae, Thermosynechococcus elongatus4
Biochemical characterization and essentiality of Plasmodium fumarate hydratasePlasmodium falciparum3

Records

Records for EC 4.2.1.2 read from the paper
EnzymeOrganismSubstratekcat (s⁻¹)Km (mM)kcat/Km (mM⁻¹ s⁻¹)ConditionsPaperOpen record
AtFUM1 (mitochondrial fumarase)Arabidopsis thalianafumarateno effector added; Table 1—0.730pH 8, 30 °CPMID 29688630Open record: AtFUM1 (mitochondrial fumarase), fumarate
AtFUM1 (mitochondrial fumarase)Arabidopsis thalianafumarate3 mM oxalacetate (OAA) present; Table 3—0.58.5pH 8, 30 °CPMID 29688630Open record: AtFUM1 (mitochondrial fumarase), fumarate
AtFUM1 (mitochondrial fumarase)Arabidopsis thalianafumarateno effector added; Table 3—1.42pH 8, 30 °CPMID 29688630Open record: AtFUM1 (mitochondrial fumarase), fumarate
AtFUM1 (mitochondrial fumarase)Arabidopsis thalianaL-malateno effector added; Table 1—1.88.5pH 8, 30 °CPMID 29688630Open record: AtFUM1 (mitochondrial fumarase), L-malate
AtFUM1 (mitochondrial fumarase)Arabidopsis thalianaL-malate3 mM oxalacetate (OAA) present; Table 3—0.537pH 8, 30 °CPMID 29688630Open record: AtFUM1 (mitochondrial fumarase), L-malate
AtFUM1 (mitochondrial fumarase)Arabidopsis thalianaL-malate3 mM asparagine (Asn) present; Table 3—0.641.3pH 8, 30 °CPMID 29688630Open record: AtFUM1 (mitochondrial fumarase), L-malate
AtFUM1 (mitochondrial fumarase)Arabidopsis thalianaL-malate3 mM glutamine (Gln) present; Table 3—0.641pH 8, 30 °CPMID 29688630Open record: AtFUM1 (mitochondrial fumarase), L-malate
AtFUM1 (mitochondrial fumarase)Arabidopsis thalianaL-malate3 mM asparagine (Asn) plus 3 mM glutamine (Gln) present—0.552.3pH 8, 30 °CPMID 29688630Open record: AtFUM1 (mitochondrial fumarase), L-malate
AtFUM1 (mitochondrial fumarase)Arabidopsis thalianaL-malateno effector added; Table 3—6.30.3pH 8, 30 °CPMID 29688630Open record: AtFUM1 (mitochondrial fumarase), L-malate
AtFUM2 (cytosolic fumarase)Arabidopsis thalianafumarate—0.457.6pH 7.7, 30 °CPMID 29688630Open record: AtFUM2 (cytosolic fumarase), fumarate
AtFUM2 (cytosolic fumarase)Arabidopsis thalianafumarateno effector added; Table 1—0.544.3pH 8, 30 °CPMID 29688630Open record: AtFUM2 (cytosolic fumarase), fumarate
AtFUM2 (cytosolic fumarase)Arabidopsis thalianafumarate—0.536.6pH 8.2, 30 °CPMID 29688630Open record: AtFUM2 (cytosolic fumarase), fumarate
AtFUM2 (cytosolic fumarase)Arabidopsis thalianafumarate3 mM oxalacetate (OAA) present; Table 3—0.59.7pH 8, 30 °CPMID 29688630Open record: AtFUM2 (cytosolic fumarase), fumarate
AtFUM2 (cytosolic fumarase)Arabidopsis thalianafumarateno effector added; Table 3—0.75.1pH 8, 30 °CPMID 29688630Open record: AtFUM2 (cytosolic fumarase), fumarate
AtFUM2 (cytosolic fumarase)Arabidopsis thalianaL-malate—0.68.7pH 7.7, 30 °CPMID 29688630Open record: AtFUM2 (cytosolic fumarase), L-malate
AtFUM2 (cytosolic fumarase)Arabidopsis thalianaL-malateno effector added; Table 1—1.78.7pH 8, 30 °CPMID 29688630Open record: AtFUM2 (cytosolic fumarase), L-malate
AtFUM2 (cytosolic fumarase)Arabidopsis thalianaL-malate—1.99pH 8.2, 30 °CPMID 29688630Open record: AtFUM2 (cytosolic fumarase), L-malate
AtFUM2 (cytosolic fumarase)Arabidopsis thalianaL-malate3 mM oxalacetate (OAA) present; Table 3—0.637.8pH 8, 30 °CPMID 29688630Open record: AtFUM2 (cytosolic fumarase), L-malate
AtFUM2 (cytosolic fumarase)Arabidopsis thalianaL-malate3 mM asparagine (Asn) present; Table 3—0.557.7pH 8, 30 °CPMID 29688630Open record: AtFUM2 (cytosolic fumarase), L-malate
AtFUM2 (cytosolic fumarase)Arabidopsis thalianaL-malate3 mM glutamine (Gln) present; Table 3—0.473pH 8, 30 °CPMID 29688630Open record: AtFUM2 (cytosolic fumarase), L-malate
AtFUM2 (cytosolic fumarase)Arabidopsis thalianaL-malate3 mM asparagine (Asn) plus 3 mM glutamine (Gln) present—0.478.2pH 8, 30 °CPMID 29688630Open record: AtFUM2 (cytosolic fumarase), L-malate
AtFUM2 (cytosolic fumarase)Arabidopsis thalianaL-malateno effector added; Table 3—2.43.6pH 8, 30 °CPMID 29688630Open record: AtFUM2 (cytosolic fumarase), L-malate
class I fumarase A (FumA)Escherichia coli(2S,3S)-tartrate—20.635pH 6.9, 37 °CPMID 26658641Open record: class I fumarase A (FumA), (2S,3S)-tartrate
class I fumarase A (FumA)Escherichia coli(S)-Citramalate—1.0835pH 6.9, 37 °CPMID 26658641Open record: class I fumarase A (FumA), (S)-Citramalate
class I fumarase A (FumA)Escherichia coli(S)-Malate—0.4870pH 6.9, 37 °CPMID 26658641Open record: class I fumarase A (FumA), (S)-Malate
class I fumarase A (FumA)Escherichia coliFumarate—0.0946.6 × 10³pH 6.9, 37 °CPMID 26658641Open record: class I fumarase A (FumA), Fumarate
class I fumarase A (FumA)Escherichia coliMesaconate—0.22250pH 6.9, 37 °CPMID 26658641Open record: class I fumarase A (FumA), Mesaconate
class I fumarase B (FumB)Escherichia coli(2S,3S)-tartrate—0.82.13pH 6.9, 37 °CPMID 26658641Open record: class I fumarase B (FumB), (2S,3S)-tartrate
class I fumarase B (FumB)Escherichia coli(S)-Citramalate—1.0438pH 6.9, 37 °CPMID 26658641Open record: class I fumarase B (FumB), (S)-Citramalate
class I fumarase B (FumB)Escherichia coli(S)-Malate—0.78370pH 6.9, 37 °CPMID 26658641Open record: class I fumarase B (FumB), (S)-Malate
class I fumarase B (FumB)Escherichia coliFumarate—0.213.12 × 10³pH 6.9, 37 °CPMID 26658641Open record: class I fumarase B (FumB), Fumarate
class I fumarase B (FumB)Escherichia coliMesaconate—0.1580pH 6.9, 37 °CPMID 26658641Open record: class I fumarase B (FumB), Mesaconate
class II fumarase C (FumC)Escherichia coli(2S,3S)-tartrate—6.20.065pH 6.9, 37 °CPMID 26658641Open record: class II fumarase C (FumC), (2S,3S)-tartrate
class II fumarase C (FumC)Escherichia coli(S)-Malate—0.93390pH 6.9, 37 °CPMID 26658641Open record: class II fumarase C (FumC), (S)-Malate
class II fumarase C (FumC)Escherichia coliFumarate—0.283.5 × 10³pH 6.9, 37 °CPMID 26658641Open record: class II fumarase C (FumC), Fumarate
CmFUM (Class II fumarase)Cyanidioschyzon merolaefumarate2350.27872pH 7.5, 52 °CPMID 33042040Open record: CmFUM (Class II fumarase), fumarate
CmFUM (Class II fumarase)Cyanidioschyzon merolaeL-malate2441.49164pH 8.5, 52 °CPMID 33042040Open record: CmFUM (Class II fumarase), L-malate
FUM (fumarase) of Arabidopsis leaf extractArabidopsis thalianafumarate—0.6—pH 8, 30 °CPMID 29688630Open record: FUM (fumarase) of Arabidopsis leaf extract, fumarate
fumarase (fumarate hydratase)Corynebacterium glutamicumfumarate100 mM phosphate buffer7204.2170 calc.pH 6PMID 16717409Open record: fumarase (fumarate hydratase), fumarate
fumarase (fumarate hydratase)Corynebacterium glutamicumfumarate100 mM MES–NaOH buffer (non-phosphate)3100.81380 calc.pH 6PMID 16717409Open record: fumarase (fumarate hydratase), fumarate
fumarase (fumarate hydratase)Corynebacterium glutamicumfumarate100 mM phosphate buffer7303.8190 calc.pH 7PMID 16717409Open record: fumarase (fumarate hydratase), fumarate
fumarase (fumarate hydratase)Corynebacterium glutamicumfumarate100 mM TES–NaOH buffer (non-phosphate)4300.381.1 × 10³ calc.pH 7PMID 16717409Open record: fumarase (fumarate hydratase), fumarate
fumarase (fumarate hydratase)Corynebacterium glutamicumfumarate100 mM phosphate buffer5103.1160 calc.pH 8PMID 16717409Open record: fumarase (fumarate hydratase), fumarate
fumarase (fumarate hydratase)Corynebacterium glutamicumfumarate100 mM Tris–HCl buffer (non-phosphate)6500.67970 calc.pH 8PMID 16717409Open record: fumarase (fumarate hydratase), fumarate
fumarase (fumarate hydratase)Corynebacterium glutamicumL-malate100 mM phosphate buffer481.827 calc.pH 6PMID 16717409Open record: fumarase (fumarate hydratase), L-malate
fumarase (fumarate hydratase)Corynebacterium glutamicumL-malate100 mM MES–NaOH buffer (non-phosphate)341.424 calc.pH 6PMID 16717409Open record: fumarase (fumarate hydratase), L-malate
fumarase (fumarate hydratase)Corynebacterium glutamicumL-malate100 mM phosphate buffer2006.332 calc.pH 7PMID 16717409Open record: fumarase (fumarate hydratase), L-malate
fumarase (fumarate hydratase)Corynebacterium glutamicumL-malate100 mM TES–NaOH buffer (non-phosphate)1101.861 calc.pH 7PMID 16717409Open record: fumarase (fumarate hydratase), L-malate
fumarase (fumarate hydratase)Corynebacterium glutamicumL-malate100 mM phosphate buffer4601335 calc.pH 8PMID 16717409Open record: fumarase (fumarate hydratase), L-malate
fumarase (fumarate hydratase)Corynebacterium glutamicumL-malate100 mM Tris–HCl buffer (non-phosphate)290558 calc.pH 8PMID 16717409Open record: fumarase (fumarate hydratase), L-malate
fumarase (RoFUM)Rhizopus oryzaemalate0.055520.5740.097pH 7.3, 30 °CPMID 27711153Open record: fumarase (RoFUM), malate
fumarase (RoFUM)variant D162KRhizopus oryzaemalate0.065121.0880.058pH 7.3, 30 °CPMID 27711153Open record: fumarase (RoFUM) variant D162K, malate
fumarase (RoFUM)variant D162MRhizopus oryzaemalate0.05560.8350.065pH 7.3, 30 °CPMID 27711153Open record: fumarase (RoFUM) variant D162M, malate
fumarase (RoFUM)variant D162WRhizopus oryzaemalate0.010820.2160.05pH 7.3, 30 °CPMID 27711153Open record: fumarase (RoFUM) variant D162W, malate
fumarase (RoFUM)variant H159SRhizopus oryzaemalate0.039930.7830.05pH 7.3, 30 °CPMID 27711153Open record: fumarase (RoFUM) variant H159S, malate
fumarase (RoFUM)variant H159VRhizopus oryzaemalate0.047931.2670.037pH 7.3, 30 °CPMID 27711153Open record: fumarase (RoFUM) variant H159V, malate
fumarase (RoFUM)variant H159YRhizopus oryzaemalate0.09811.2820.075pH 7.3, 30 °CPMID 27711153Open record: fumarase (RoFUM) variant H159Y, malate
fumarase (RoFUM)variant N161ERhizopus oryzaemalate0.00680.1560.043pH 7.3, 30 °CPMID 27711153Open record: fumarase (RoFUM) variant N161E, malate
fumarase (RoFUM)variant N161FRhizopus oryzaemalate0.029250.9090.032pH 7.3, 30 °CPMID 27711153Open record: fumarase (RoFUM) variant N161F, malate
fumarase (RoFUM)variant N161RRhizopus oryzaemalate0.044670.7970.055pH 7.3, 30 °CPMID 27711153Open record: fumarase (RoFUM) variant N161R, malate
fumarase (RoFUM)variant P160ARhizopus oryzaemalate0.034730.2680.128pH 7.3, 30 °CPMID 27711153Open record: fumarase (RoFUM) variant P160A, malate
fumarase (RoFUM)variant P160HRhizopus oryzaemalate0.0330.5590.058pH 7.3, 30 °CPMID 27711153Open record: fumarase (RoFUM) variant P160H, malate
fumarase (RoFUM)variant P160TRhizopus oryzaemalate0.028450.350.08pH 7.3, 30 °CPMID 27711153Open record: fumarase (RoFUM) variant P160T, malate
fumarase C (FumC)Escherichia colifumarate60—600pH 7.5, 25 °CPMID 14990798Open record: fumarase C (FumC), fumarate
fumarase C (FumC)Escherichia colimalate129—430pH 7.5, 25 °CPMID 14990798Open record: fumarase C (FumC), malate
fumarase C (FumC)variant H129NEscherichia colifumarate60—600pH 7.5, 25 °CPMID 14990798Open record: fumarase C (FumC) variant H129N, fumarate
fumarase C (FumC)variant H129NEscherichia colimalate41—600pH 7.5, 25 °CPMID 14990798Open record: fumarase C (FumC) variant H129N, malate
fumarase C (FumC)variant K127DEscherichia colifumarate68—750pH 7.5, 25 °CPMID 14990798Open record: fumarase C (FumC) variant K127D, fumarate
fumarase C (FumC)variant K127DEscherichia colimalate180——pH 7.5, 25 °CPMID 14990798Open record: fumarase C (FumC) variant K127D, malate
fumarase C (FumC)variant R126AEscherichia colifumarate22—50pH 7.5, 25 °CPMID 14990798Open record: fumarase C (FumC) variant R126A, fumarate
fumarase C (FumC)variant R126AEscherichia colimalate30—33pH 7.5, 25 °CPMID 14990798Open record: fumarase C (FumC) variant R126A, malate
fumarase C (FumC)variant R126A/H129NEscherichia colifumarate9.6—17pH 7.5, 25 °CPMID 14990798Open record: fumarase C (FumC) variant R126A/H129N, fumarate
fumarase C (FumC)variant R126A/H129NEscherichia colimalate15—7.5pH 7.5, 25 °CPMID 14990798Open record: fumarase C (FumC) variant R126A/H129N, malate
fumarase D (FumD), promiscuous mesaconase/fumaraseEscherichia coli O157:H7(2S,3S)-tartrate—2.60.05pH 6.9, 37 °CPMID 26658641Open record: fumarase D (FumD), promiscuous mesaconase/fumarase, (2S,3S)-tartrate
fumarase D (FumD), promiscuous mesaconase/fumaraseEscherichia coli O157:H7(S)-Citramalate—0.92110pH 6.9, 37 °CPMID 26658641Open record: fumarase D (FumD), promiscuous mesaconase/fumarase, (S)-Citramalate
fumarase D (FumD), promiscuous mesaconase/fumaraseEscherichia coli O157:H7(S)-Malate—0.2260pH 6.9, 37 °CPMID 26658641Open record: fumarase D (FumD), promiscuous mesaconase/fumarase, (S)-Malate
fumarase D (FumD), promiscuous mesaconase/fumaraseEscherichia coli O157:H7Fumarate—0.9750pH 6.9, 37 °CPMID 26658641Open record: fumarase D (FumD), promiscuous mesaconase/fumarase, Fumarate
fumarase D (FumD), promiscuous mesaconase/fumaraseEscherichia coli O157:H7Mesaconate—0.152 × 10³pH 6.9, 37 °CPMID 26658641Open record: fumarase D (FumD), promiscuous mesaconase/fumarase, Mesaconate
fumarate hydratase (PfFH, class I FH)Plasmodium falciparumFumarate1822.670pH 8.5, 37 °CPMID 29449371Open record: fumarate hydratase (PfFH, class I FH), Fumarate
fumarate hydratase (PfFH, class I FH)Plasmodium falciparumMalate1591.2130pH 8.5, 37 °CPMID 29449371Open record: fumarate hydratase (PfFH, class I FH), Malate
fumarate hydratase (PfFH, class I FH)Plasmodium falciparumMesaconate603.219pH 8.5, 37 °CPMID 29449371Open record: fumarate hydratase (PfFH, class I FH), Mesaconate
LmFH-1Leishmania major(S)-malate12.92.35.6 calc.pH 8.5PMID 22569531Open record: LmFH-1, (S)-malate
LmFH-1Leishmania major(S)-malateaerobic0.551.20.46 calc.pH 8.5PMID 22569531Open record: LmFH-1, (S)-malate
LmFH-1Leishmania major(S)-malate3641328pH 9, 23 °CPMID 31743022Open record: LmFH-1, (S)-malate
LmFH-1Leishmania majorFumarate28.32.511 calc.pH 8.5PMID 22569531Open record: LmFH-1, Fumarate
LmFH-1Leishmania majorFumarateaerobic1.91.31.5 calc.pH 8.5PMID 22569531Open record: LmFH-1, Fumarate
LmFH-1Leishmania majorfumarate11594.2280pH 9, 23 °CPMID 31743022Open record: LmFH-1, fumarate
LmFH-2Leishmania major(S)-malate151.412.612.0 calc.pH 9PMID 22569531Open record: LmFH-2, (S)-malate
LmFH-2Leishmania major(S)-malateaerobic24.95.74.4 calc.pH 9PMID 22569531Open record: LmFH-2, (S)-malate
LmFH-2Leishmania major(S)-malate53711.547pH 9, 23 °CPMID 31743022Open record: LmFH-2, (S)-malate
LmFH-2Leishmania majorFumarate204.25.736 calc.pH 9PMID 22569531Open record: LmFH-2, Fumarate
LmFH-2Leishmania majorFumarateaerobic48.61.926 calc.pH 9PMID 22569531Open record: LmFH-2, Fumarate
LmFH-2Leishmania majorfumarate1.5 × 10³4.6330pH 9, 23 °CPMID 31743022Open record: LmFH-2, fumarate
LmFH-2variant D135ALeishmania major(S)-malate0.0755.30.014pH 9, 23 °CPMID 31743022Open record: LmFH-2 variant D135A, (S)-malate
LmFH-2variant D135ALeishmania majorfumarate0.231.80.13pH 9, 23 °CPMID 31743022Open record: LmFH-2 variant D135A, fumarate
LmFH-2variant H334ALeishmania major(S)-malate57.64.612.5pH 9, 23 °CPMID 31743022Open record: LmFH-2 variant H334A, (S)-malate
LmFH-2variant H334ALeishmania majorfumarate1964.247pH 9, 23 °CPMID 31743022Open record: LmFH-2 variant H334A, fumarate
LmFH-2variant R173ALeishmania major(S)-malate0.0334.70.007pH 9, 23 °CPMID 31743022Open record: LmFH-2 variant R173A, (S)-malate
LmFH-2variant R173ALeishmania majorfumarate0.152.60.06pH 9, 23 °CPMID 31743022Open record: LmFH-2 variant R173A, fumarate
LmFH-2variant R421ALeishmania major(S)-malate0.1444.10.035pH 9, 23 °CPMID 31743022Open record: LmFH-2 variant R421A, (S)-malate
LmFH-2variant R421ALeishmania majorfumarate0.724.90.15pH 9, 23 °CPMID 31743022Open record: LmFH-2 variant R421A, fumarate
LmFH-2variant R471ALeishmania major(S)-malate0.0384.30.009pH 9, 23 °CPMID 31743022Open record: LmFH-2 variant R471A, (S)-malate
LmFH-2variant R471ALeishmania majorfumarate0.122.30.05pH 9, 23 °CPMID 31743022Open record: LmFH-2 variant R471A, fumarate
LmFH-2variant T467ALeishmania major(S)-malate0.0524.40.012pH 9, 23 °CPMID 31743022Open record: LmFH-2 variant T467A, (S)-malate
LmFH-2variant T467ALeishmania majorfumarate0.23.10.06pH 9, 23 °CPMID 31743022Open record: LmFH-2 variant T467A, fumarate
TeFum (Class II fumarase)Thermosynechococcus elongatusfumarate370.14278pH 7, 50 °CPMID 33042040Open record: TeFum (Class II fumarase), fumarate
TeFum (Class II fumarase)Thermosynechococcus elongatusL-malate150.276pH 7.5, 50 °CPMID 33042040Open record: TeFum (Class II fumarase), L-malate